Gene PICST_33885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33885 
Symbol 
ID4840962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp697427 
End bp698371 
Gene Length945 bp 
Protein Length314 aa 
Translation table12 
GC content43% 
IMG OID640392277 
Producthypothetical protein 
Protein accessionXP_001386725 
Protein GI150866953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.655262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.131716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC TCTACCAACG GAAAGTGAAC AATTACGAAC AGAGGAAGCA TGACTTGGTG 
CATTCGTATC TTGGACTCAG GGAGAAGTTT GCCCAGATGG ACGATTCTAA TCATAACTTG
GAAAACACCT ATGAGATTCT TCTCCAGTTG GATGAAATAT TGTATGAGTA CAGAGTTGTG
AAAACTTATC TTGAAAGCAG ACAAGAAGAC TTATCACCCA ACGACAACAT TTTGCTAGCA
AGAATGGACG CTTTGGCTAT TCGTCTTGAA AAACTGTTGC CCATACCAGA CATCATCTCA
CGAGTACAAG AACTAGCCAT ACTAAGAAGA CAGATCTACG AGAATGCTAA GGAAGCTTCA
AAGATTTTGA ATCTCCACGA GCTACTGGAT CCTCGTGCCA GCAGATTCAT CGAAAGGTCC
TCAGTAACAA GAAGACCCAA AGGTGCACCT CCATTAGAAA AATGGGAGGA AGCAACTTGG
TCTAAGGATC ATGCCAGGGT AGTATTTGAT GCAGCCAGAT TAAGAAAATC TACCGACGAA
AGAGCCGAGT ATATACGCCA AACATTTGAA GGTAAGTTCG GTATCGCCAT AAGTTCAAAG
GCTGCGCACT ATCTCCTCTT GCACTACGGA TTTCGAGACA CAGGTGTAAA CTTAAAAATC
TTCCACTCCA TAATGGACGA GGCATTTGTA TTGAACCAAC ATCTTCCAGC ATACCCAAGA
GCAGCAGCCA TGCTGGAGTA TTTCAGACAG AAGGTCGGTG TATCCATCAA CAAGAGCGAA
TGCACTTACG TAGCCAAATT CCGCGAAATA ATGATGAAAG TGTACCATTC GCCTGAGGAG
CCAGTGGAAA ACTACATCGA GTTCCAGAAC CAGGCACCTT ATTTGAACGG AGAGATGACC
CACATCATCA ACGACAAGAT CACCATCAAA GAAAACACAA TCTAA
 
Protein sequence
MSSLYQRKVN NYEQRKHDLV HSYLGLREKF AQMDDSNHNL ENTYEILLQL DEILYEYRVV 
KTYLESRQED LSPNDNILLA RMDALAIRLE KSLPIPDIIS RVQELAILRR QIYENAKEAS
KILNLHELSD PRASRFIERS SVTRRPKGAP PLEKWEEATW SKDHARVVFD AARLRKSTDE
RAEYIRQTFE GKFGIAISSK AAHYLLLHYG FRDTGVNLKI FHSIMDEAFV LNQHLPAYPR
AAAMSEYFRQ KVGVSINKSE CTYVAKFREI MMKVYHSPEE PVENYIEFQN QAPYLNGEMT
HIINDKITIK ENTI