| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33873 |
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| Symbol | MSP1 |
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| ID | 4841135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 670230 |
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| End bp | 671303 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392450 |
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| Product | 40 kDa putative membrane-spanning ATPase |
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| Protein accession | XP_001386533 |
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| Protein GI | 150866810 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.767325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0397668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGT TCAAACTCGA TATAAAGTTT CTTGGAGACT TGTTTATTCT TGCGGGAGCT
GGGCTCTCAG TATATTTCAT ACTCAACAAT ATACTCAACG ACTATGTAGA CAACTCTATG
AAGAACAAGG AATCGGAGAA AAAGGGCAAG GGCATTCTCA AGAAATTACA GAGTTCTAAT
CCGCACCTCC GCAACATCTC CCTCAACCAG TACGAGAAGC TGTTGCTCAA TTCGTTGGTT
ACACCAGAAG AAATATCAGT AACTTTCAAT GATGTGGGCG GTTTGCAAGA CATAATTGAC
GAGTTGAGGG AAGCGGTGAT TCTTCCTTTA ACAGAACCAG AGCTTTTCGC TACCCATCTG
GATTTGATCC AGTCACCTAA GGGTGTCTTA TTCTACGGTC CCCCTGGATG TGGTAAGACA
ATGTTGGCCA AAGCTATTGC CAAAGAAAGT GGTGCGTTTT TCTTGCTGAT AAGGATGTCG
ACTATTATGG ACAAATGGTA CGGTGAGTCG AACAAGATCA CCGATGCCAT CTTCTCACTT
GCTAACAAAT TGCAACCCTG TATTATTTTC ATTGACGAAA TAGATTCGTT TTTGAGAGAC
AGGTCTTCCA GCGACCACGA AGTCAGTGCC ATGTTAAAGG CTGAATTCAT GACGTTGTGG
GACGGCTTGA AGTCTAACGG AAGAATCATG GTAATGGGCG CTACCAATCG TAAGAGTGAC
ATTGACGAAG CCTTCTTGAG AAGATTACCC AAAACTTTTG CTATTGGCAA ACCAAACGAA
TCGCAAAGAC GTTCCATATT GTCTAAAATA CTAAGTGGAG CCAAGCTCGA TGAAAAAGAT
TTTGACTTGG AATACATCGT TGCTAATACA AAAGGCTTTA GTGGTTCTGA CTTGAGAGAA
TTATGTCGTG AAGCTGCCAT TCTTCCCGTC AGGGAGTACA TCAGAGAGAA TTACAACTAT
AGGAGTGGGA AGTTGAGCAA GGATGAAAAT GAAGACATGC CTGTTAGACC GTTGAAGACT
TCTGATTTTG TAAAGACTGC CGAGTCCACC ATTCAACCTG CTACCATTGA TTAG
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| Protein sequence | MAKFKLDIKF LGDLFILAGA GLSVYFILNN ILNDYVDNSM KNKESEKKGK GILKKLQSSN
PHLRNISLNQ YEKSLLNSLV TPEEISVTFN DVGGLQDIID ELREAVILPL TEPELFATHS
DLIQSPKGVL FYGPPGCGKT MLAKAIAKES GAFFLSIRMS TIMDKWYGES NKITDAIFSL
ANKLQPCIIF IDEIDSFLRD RSSSDHEVSA MLKAEFMTLW DGLKSNGRIM VMGATNRKSD
IDEAFLRRLP KTFAIGKPNE SQRRSILSKI LSGAKLDEKD FDLEYIVANT KGFSGSDLRE
LCREAAILPV REYIRENYNY RSGKLSKDEN EDMPVRPLKT SDFVKTAEST IQPATID
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