| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33868 |
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| Symbol | |
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| ID | 4840904 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 653639 |
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| End bp | 657884 |
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| Gene Length | 4246 bp |
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| Protein Length | 1403 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392219 |
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| Product | predicted protein |
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| Protein accession | XP_001386530 |
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| Protein GI | 150866807 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.860131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.413671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC CACCAGACCA TGCCGCAGAC GAGGATGATA TAGACCTCAG CAGCGTCATA
GCCAGTACGC TCACGGCATT AACGGAGCTG GGTGATGTTG ATGTTGATGC TACGAAAGAC
CAAAGCGACG ATCACCGGTT GCAAAACGAG CGGCTGCAAA ATCTGCTGCA CCTCGAATTG
CTGCACCCCA CTCTGCAAGA TGAGCACATA CATAATTCAG GCGATAACAA GGATGAAAAC
CTTGACTTGG AAAGTGCCAT TGGCAACGTA TTTGACCAGT TTGACTTCGG CAGTTTGGCA
AACCAGTCTG AACAAGAACT GCACCAACAA CAAGACACTC TTTACGAGCA ATCGGAGCCT
CGTGTACAGC AATTACAGCA GGAATCTGTA ATAGACGAGG AAACGTCAGT TAAGCGGAAA
TCTTCTGGCC CTGTAGAAAC TGCAGCTGCT GCTTCTATTT CAGATGCGGT AGAATTAAAA
AATGAAACTT CAGAAACCCG TCCCCATACA AATACTGCTC TTGTACAAGA AAATCAGCAA
AAGGAAGACC TCGGTCTAGA TGATGCCATT GGAAAAGCAT TTGAGCATGC GTTGCTGAAA
GACACGAATC ATGAACAAGA TGTATCTAGT AATGATAAAG TTGTGGAATC TCCCCCACAT
GTTCAAGATC AACAAAATGA TCAGGAACAA GTACAGGAGC AAGTAGAAGA AGTCAGTCGT
CATGAGCCAT TAGACCAACA AGGTAAAGAT CAAGAACATA CACAAGAATA CAAAAAGGAG
CAAAAGGGAC ATGATGATGA TGATGAATTT GATTTGGATC TTGATGCTGC CATTGGAAAC
GCATTCAAAG ATGCATTCGA GGAATCAGGT GATAAAAGTG ATCAAATCGA GAAGCTGCCA
CGACATGAAC AAACTGACAG GAACGATGAT ATTGATCTTG AAGACGCGAT AGGCAATGCA
TTTAAAGCAG TACATTCAGA ATCAAAAGAT GAAGCAGGAC AACAACATAA TGGCGAGAAT
GAGCCTTCTA AAGATAATCC TGAAGACGAT GAATTGGATT TGGATGCAGC GATAGGGAAT
GCCTTCAGGT CTACTTTTGG CGAAGATAAT ACAACCGAAC TAACAAAAAC AGCACATGAA
TTGAAACATG AAAATATACC AATATCAGAT ATTTCAGCTA GCGGGACCCA ATCTAAGGAT
GTTATCGAAA CAAGACCAGT GCTAGAGACG GTTGAACAAA ACAGAAGTGA GACTACCATC
ATGGGTGAAG TTCACGAGGA CGAAGAAGTA GATCTAGAAG CTGCAATTGG TACAGTGTTT
GCCAATTTGA CCACCGAAAA ACATACGGAT GAGCCGACAC ACAAAGATAT AAGTGATCAG
ACTTTTGGTC ATGACGCTTC TCCCCATGAT GAAGTTCCTG AGGCTAAAGC AGAAGGAGAT
CAAGATGATC TCGATCTTGA GGCTGCTATT GGTAATGCTT TCAGAAGCGT CATCCCCGAA
GAAAAAGAAG CGCATGAAGA GATAAAGCAG CACGAGGAAG AAGATCCTGA TGCTGCCCTT
GAGAGTGCAA TTGGTTCTGC CTTCGAGTCG ATTTCTACCT TGAAACAGTC AGACGGAAAA
CCTCACACAA CCCACGAACA CATAGATCAA AATCACACCA ATGATGACGA TTTAAGTGCC
ATTATATCGT CCACCTTTCA GGAAACATTG AATACAAATG TTGCACATGA TTCAGCAGAT
GAACAAGACG ACACATCAAT GCAAGACGCA ATAGCCGAAG CTTTCAAGTC GGCGGCAGAT
GATACTCTGC TCACACATGC ATCAACACAA GAACCTCAAT TAGACTTGTC TAATTTAGTA
CAAAATATTG TTCACCAGGT TGCAAGTCAG GAAAATTCGG AAAATGAGAG CCTTCCTATT
CCTGGGAATG TTTTACAGGA TCTAGCACAA GAAATCGCCA ACCAAGTTCA AGGTTACTTG
GCTGAAGGAG ATTCAAGTAA GCCCTTATCT GTTTCAGGAG GCTTACCTAA AATCGATGAT
AATGTCCTTG CACACTTCCA GAAAGAAGCT CACAAAGAGG GCTCAGATAA GCTTTCTGAA
CCGGCACCTT ATTTGCAAAC TGCTCTTGCA ACTGCTGTTC GTAATGCCAT AGGCTCAAAT
GCTTCGGCAA CTTTTGAGAA GCAACCGCCT CATGACGATA AAGAAGCCGA CTTAGAGCAA
TTGCAAATGA ATGACATTTT ACAAAATGCA TTTAACATGG CAAAAGAAAA TCCCCAAGAA
TTGCTCTCTG ATTTAGATGA AAACGAACAT TCAACCATGC ATCAGTCTGT TCCATTGACA
GATTCTCTTC GTTCATCAGC AAATCTACCT CAAAACTTAC AAACATTACC TCGAAAGATT
TCCTCTTCTA CGGCAACGTT TTTGGAATCT CTTAAGAGGT CCAACGAAAT CACTTTGAGT
CTGGGAACTA AAAGCTCCAA GACGTCGAAA GCTGCCATCC AAACTGGAAC CGAACCAAGC
CTCTCTGAAC CCCAAAAACG TAAATCGTTA TCGATAGCTG AAACGTTGGC TTTACATAGA
TCATCTATGA ACAATGGACC TACTAGAAAC TATTCGGCAA TTGATAGTTT GGATACACCT
TTCAGTGATC GAATCGCTTC GATTACTCCC AGTCTTAATT CTCAAATTTC TAGTGTTCTC
ACAGCTATAA CTTCGAAGAT TTCCAATGGG GACGGATCCA AGGATACTGA CTTGCTCAGT
GTCATTAGAC AAATGACGAG TTCTTATTCA CCAACCACAT TGCCGTTAGC TAGTTATCCA
TCAGCAACTG AGATCATCTC TAGTTATGGA TCAGCAATTG AAAAAAACAA AATCATCAAA
ACGTTGAGGC TTGCAAAGCG CTTCTTAGAA GATCAATCTA CAGATGAAAT AGATAACAGA
AGCGCAGCAA ATGTGATTTC AAACATTATT GCCCAGTTTA GTATCTCTGC TGTTGGCCTG
GGCTTCTCTG GATCTGCCTC CTTGGCTGCT TCAGAATATT CTAATATCAA AAATGAGCAG
ATTGCATCTG TTAAGGAGTC AATCGTCTCC GCAATTTCCA ATTTTGCATC CACTGCCAAG
CTAAGCAAGG GTTCCTCTTT TCTTTCTGGG ATAAGAGTTG ATACGCCTGA GTACCGAGAA
AAGATCCGTT CGGAAAATAG AGAAAGAAAG AAAAGATGGA GAGAAGAAAA TGCCGAGAGA
AACAAAGATA ACGACTTGAG ATCAAGAGTC TTGAAGAAGG CTACTTCCTT GTTTGGAGAA
GCAGAGTCTG CTGAAAAGAA AGCTTGGGCT GACGAAGAGT TTAACAAAAG AAGACAAAAA
CGTTTAACTA GGAAGTTGAA AGGACTGGAA ACAAAGTCTG AGGATTTCGG AGATCTCGAA
GGAAGGCTGC CTGAAGACCT GGGTTCAAAT GTCTATTTGC ATGATTCAAA TTTTATAAAG
CCAATTTCCG ATGTTTTCAA TATTCTTTCA GCTTGCACTC AAAAGGAAAG TCCTGGAGTT
GCATTGGCAG CAACAGCAGC GGCAACAGCA ACAGTGGCAG CTATCTACAC TGATGACAAT
AAAGATGCAA ATAGGGACCT GGTTGATGCT GCGGTGTCTT CATTAATATC GAAGTTAATG
GAAAAGGCTA ATTCTGCTGG AGAACAAGAA AGAATAACTA GTCTTTCGAA AGGCGTCACT
TCTTCCTTTA AGCTCAGCTC CTCTCCGCCC TTACCGACAA CTCCTCCATC CATGCCTTCA
CAATTGCCCG ACGCAGAATT GAGCTCGCTT GTGAAAACTG GAAGTGGTTC AACCAGTGGG
ATAATAAGCA GGCTTTCAGC TACAATAAAG AATTTGACTT CAAAGAACTC TTTTCAGGGT
ACCATGCTTG GTCTCAGCAA TTTAAACTTA CAAGAAAAGA GATCTTCTGA GAGTAGACTA
CAGTCTGACC CCAAACGTGC TAAACTTGAA CAAGATAATG ACAAACAAAC TATTTCAAAA
ATCGTATCTG ATCTAGATCA AATCAGAAAC TCAATAGTGA CAAGTACTGG TGCTAATATA
TGGAGCTCCA GTAGTCTCAA AATGCCCCAA TACGGTAAGA GAGAAGGGCT GGACGTATCT
AAATCTAGTG CTGGAGAGCC CGCAATCAAA AGCGAATACC CCTCCTTATC GTTGCCTACA
GCATCACCAT TTATATCGAA CAAGGTTCAC TTGGGTTTGG GTATAG
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| Protein sequence | MSAPPDHAAD EDDIDLSSVI ASTLTALTES GDVDVDATKD QSDDHRLQNE RSQNSSHLEL
SHPTSQDEHI HNSGDNKDEN LDLESAIGNV FDQFDFGSLA NQSEQESHQQ QDTLYEQSEP
RVQQLQQESV IDEETSVKRK SSGPVETAAA ASISDAVELK NETSETRPHT NTALVQENQQ
KEDLGLDDAI GKAFEHALSK DTNHEQDVSS NDKVVESPPH VQDQQNDQEQ VQEQVEEVSR
HEPLDQQGKD QEHTQEYKKE QKGHDDDDEF DLDLDAAIGN AFKDAFEESG DKSDQIEKSP
RHEQTDRNDD IDLEDAIGNA FKAVHSESKD EAGQQHNGEN EPSKDNPEDD ELDLDAAIGN
AFRSTFGEDN TTELTKTAHE LKHENIPISD ISASGTQSKD VIETRPVLET VEQNRSETTI
MGEVHEDEEV DLEAAIGTVF ANLTTEKHTD EPTHKDISDQ TFGHDASPHD EVPEAKAEGD
QDDLDLEAAI GNAFRSVIPE EKEAHEEIKQ HEEEDPDAAL ESAIGSAFES ISTLKQSDGK
PHTTHEHIDQ NHTNDDDLSA IISSTFQETL NTNVAHDSAD EQDDTSMQDA IAEAFKSAAD
DTSLTHASTQ EPQLDLSNLV QNIVHQVASQ ENSENESLPI PGNVLQDLAQ EIANQVQGYL
AEGDSSKPLS VSGGLPKIDD NVLAHFQKEA HKEGSDKLSE PAPYLQTALA TAVRNAIGSN
ASATFEKQPP HDDKEADLEQ LQMNDILQNA FNMAKENPQE LLSDLDENEH STMHQSVPLT
DSLRSSANLP QNLQTLPRKI SSSTATFLES LKRSNEITLS SGTKSSKTSK AAIQTGTEPS
LSEPQKRKSL SIAETLALHR SSMNNGPTRN YSAIDSLDTP FSDRIASITP SLNSQISSVL
TAITSKISNG DGSKDTDLLS VIRQMTSSYS PTTLPLASYP SATEIISSYG SAIEKNKIIK
TLRLAKRFLE DQSTDEIDNR SAANVISNII AQFSISAVGS GFSGSASLAA SEYSNIKNEQ
IASVKESIVS AISNFASTAK LSKGSSFLSG IRVDTPEYRE KIRSENRERK KRWREENAER
NKDNDLRSRV LKKATSLFGE AESAEKKAWA DEEFNKRRQK RLTRKLKGSE TKSEDFGDLE
GRSPEDSGSN VYLHDSNFIK PISDVFNILS ACTQKESPGV ALAATAAATA TVAAIYTDDN
KDANRDSVDA AVSSLISKLM EKANSAGEQE RITSLSKGVT SSFKLSSSPP LPTTPPSMPS
QLPDAELSSL VKTGSGSTSG IISRLSATIK NLTSKNSFQG TMLGLSNLNL QEKRSSESRL
QSDPKRAKLE QDNDKQTISK IVSDLDQIRN SIVTSTGANI WSSSSLKMPQ YVSESPQSKA
NTPPYRCLQH HHLYRTRFTW VWV
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