Gene PICST_33860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33860 
Symbol 
ID4840899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp638265 
End bp638669 
Gene Length405 bp 
Protein Length134 aa 
Translation table12 
GC content46% 
IMG OID640392214 
Productpredicted protein 
Protein accessionXP_001386525 
Protein GI150866804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.478938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGGA AGAAAGCATT CTTCTACATA TTGTTTTTGG CCTCGATCGC TTTGGCAGCT 
GACGACACTA CCACGACCAC TACTACCAGT TCTGCTTCGA AGACTTTAGT ATGGGTCACT
GGCACTAATT CTCTTGGTCT ACTCACTACT ACCCAATCTG CCTACACCCA GACGTTTGCG
CTGGTATTTG TAGCAGCTGT TTCTCCAATG TCCGGAAGTA TTGGCTTGGG TTCGCTCGAT
GCTAGCGGTG TGGGAGATAT CAGAAGCTAC GAAACAGTTA CTGTAAGCGC AGCAGCACCG
CCATCCCAAA AGTTATGGGT CCCTGGAGGT GAAGCATCCT ACAGACTGAT TAGAATAATT
ACATTGGCTA CATTGACACT CGTCTCATCT TTGATGTTCT TGTAA
 
Protein sequence
MFWKKAFFYI LFLASIALAA DDTTTTTTTS SASKTLVWVT GTNSLGLLTT TQSAYTQTFA 
SVFVAAVSPM SGSIGLGSLD ASGVGDIRSY ETVTVSAAAP PSQKLWVPGG EASYRSIRII
TLATLTLVSS LMFL