Gene PICST_33856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33856 
Symbol 
ID4841162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp631100 
End bp631450 
Gene Length351 bp 
Protein Length116 aa 
Translation table12 
GC content49% 
IMG OID640392477 
Productpredicted protein 
Protein accessionXP_001386522 
Protein GI126140000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.682867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.484619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTAT CCAGTACTCT CGCTAATACA GACCAAACTC CTCAACTAAA GAGAAGAAAG 
TTGGATCAAC CTGTACCGAT ATATCCAACA AAGACAACAG CCATGTCCTC CAACAACAGC
TTTATTAACC AGCACGGTAC CATCGTCAAC AACACCAACG GCACCATCAC ACCTAACACG
TACGCCGGTG TGACCGACGA CGTTGAGATG CTCACAGAAG AAAGCTTCTC CAAGAAGCAC
ACTTCTCTCG AATGTCCTTG TGGACACCTT CATGGACCGG GCCAGGGCCA CGACCATGAC
ATTGCAGCCG TTGGCTTCTT AGCAGAGCCT TTGTTGCGTG GTCCAGAATA A
 
Protein sequence
MSLSSTLANT DQTPQLKRRK LDQPVPIYPT KTTAMSSNNS FINQHGTIVN NTNGTITPNT 
YAGVTDDVEM LTEESFSKKH TSLECPCGHL HGPGQGHDHD IAAVGFLAEP LLRGPE