Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33854 |
Symbol | |
ID | 4841161 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 626487 |
End bp | 627827 |
Gene Length | 1341 bp |
Protein Length | 435 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640392476 |
Product | predicted protein |
Protein accession | XP_001386521 |
Protein GI | 150866802 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.893021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.424834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTGGC CCAAGCATAC ATTTCCAAAG TCGGTTGCTG CTATCCTTAG GAAAGGGCTT TGGGCGGAAA GTGAAAAGGG CGAAAATGAC TACCAATTAG CTCTAAAGTA CTATTTAGAA GCTCTTGAGC ATTGTAATGA AATTGGCATG GATACTCTTT CTGATGAATA CACGGGAATC CAATTGAAAG TAGGAGAAAT GTTTGAACGT CTCAACATGC CCCAGGACGC AGCATTTGTA TATAACGAGA TTGCCACGTT ATATTTGATG GTTTTGACAG CAACACCAGA GTCAGAACAA GGTAGAAGAA TCAACGACAG AGAGCATAGA CGTCATCTCA TCCAGAAAGA TTTGAGAATC GCAACCAAGT TGGTAGAGTT GAACCGAGAC AATCCACAAT TGTGTCGAGC AATCTTGATT ACCCACTTGA TTATTGCTCA GGACGAAGTT AGAAAACAGT CTCCATCGTC TGCTAGCCAA TTGGCTAAGT TAACCCTGCC TGATGAGGTG CACACAACAG ACAACTATAA GGCTACTGTA CATGACGACT CAATAGTAAT TAGGAATGGA GATGTAGTCA CTAGTTTCAA AAAGAGTCCT GAACTATGGG AGCCTTTTGC AGAGGAGTAC TTCAATGCCA TGGACTTGTT GGGTGCTTTC TGTATTTCAC TTGGAGACTT ATCCATGGCT TCTAAAGTGA AGATATCCAT GACTGAGTCC ATGTTATTGG CAGATGTTGA ACCACACAAG ATTCTTCTTT CCCAGTGTAA TCTAGGATCC TTGCTTTACT TGCAGGCTGA AGAGTTTCAA GCGCAAGAAA TTGCATGGAG AAGAAAATTC TCCCAACAAT CGGGTATTGA ATACGAGAAG ATCAAGAGTG AAGAGTTGTT AAATAATCTT TCCAACTCAG AACAGGTTCA GAAGGAGTTG GAAAAAGCTA TCCCTGCTGC TGATAAAATA AAATATGAAG AATCCATTGC TTCAAAAGAT AAATGTCTCC AATTATCAAT CAAATCCTAC GAATCAGTAC TTGAGTTTGC CAAAGGTTTA CCTCAGGAAA TCGTCAAGGG CAATACCGCA GTCGGTGAAG GAGTAGCATT AGCCACTTAT GGGTTAGGTG TTGTATATCT TCATCTTTCG CAATATGATA AAGCTGAGAG ATTGTTGAGA GAGTCGAGAG TTAGGTCGAA GAACTGTGGC TACGATGAAT TGATCACTCA AATTGAACGT GAATTGAATA AGTTATTCAA AGAAAAGAAG AATTTGAAGA TTGCAGATCC TAAGAATCCA GCCCCTACTG ATGAAGACAT TGAGATAGAT ATCCTCTTGA AGAAAACATA A
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Protein sequence | MFWPKHTFPK SVAAILRKGL WAESEKGEND YQLALKYYLE ALEHCNEIGM DTLSDEYTGI QLKVGEMFER LNMPQDAAFV YNEIATLYLM VLTATPESEQ GRRINDREHR RHLIQKDLRI ATKLVELNRD NPQLCRAILI THLIIAQDEV RKQSPSSASQ LAKLTSPDEV HTTDNYKATV HDDSIVIRNG DVVTSFKKSP ELWEPFAEEY FNAMDLLGAF CISLGDLSMA SKVKISMTES MLLADVEPHK ILLSQCNLGS LLYLQAEEFQ AQEIAWRRKF SQQSGIEYEK IKKQVQKELE KAIPAADKIK YEESIASKDK CLQLSIKSYE SVLEFAKGLP QEIVKGNTAV GEGVALATYG LGVVYLHLSQ YDKAERLLRE SRVRSKNCGY DELITQIERE LNKLFKEKKN LKIADPKNPA PTDEDIEIDI LLKKT
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