Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33805 |
Symbol | |
ID | 4840810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 525562 |
End bp | 526335 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640392125 |
Product | predicted protein |
Protein accession | XP_001386693 |
Protein GI | 150866931 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAT CAAATTTTAG AAAAAGAAAG AGAGTCCCTT CGTTCCAACC AGAAGGTCTG GGACTTCTTC TTTCAGATCC TCCGCAAGCC AAACAGGCCG AAAATATCAT CACCGACGAG AAGGTGATCA ATTATATTCT CAAATTACAG CCAAAGACCA CAGAACGAAA GGAAGTGTTC CTCAAACTAG TACTTTCGTA CACCGAGGCA GAGTTCCTTT CCTCATCTGA ATTGAATCTC GAAGATGCAC TTTCCAAGAA ATTCCAAGTA AAAAGTTTCC TGATCTCGCC CCAAGTAGAT GGAGTTGTAG ATAGATTCAT AACATTATAC GGCGACAACG AACTGATAGC AAGAGGTGTG GTATATATAA GTTTTTTGTT GAAAGTTAAG CTCAATCGAT TTATTCGAGG AGAGTTATAC ACTCTCAAGT CCAACAATTA TGACATAGAA ATGGTGATAA GGCGAGAAGT TTATCCCCAC GATAACTTCC TAGATTCCTT CAATTTTAAT TTATATGAAG ACACGTTTCC CTTATGGTAT AACCAGAATC GTGGAGTCCA TCTCTTGCAC ATACGATCTG ATTTTTTGAC ATTGTTTCTC TTCACTCTGG CCCTACTCTT AAGATATAAA GATTCAGAAG AGGATTTCAT TATTGTGCAG ACACCACTAT TCGGTGTTCA CACAGATCCC AACTTATTTG CTATATCGGA TACGAATAAG GAGATGTTGG AGAAGAGTAG AAACGGAGTT GTGTCATACT TGCATCCAAA ATAG
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Protein sequence | MDRSNFRKRK RVPSFQPEGS GLLLSDPPQA KQAENIITDE KVINYILKLQ PKTTERKEVF LKLVLSYTEA EFLSSSELNL EDALSKKFQV KSFSISPQVD GVVDRFITLY GDNESIARGV VYISFLLKVK LNRFIRGELY TLKSNNYDIE MVIRREVYPH DNFLDSFNFN LYEDTFPLWY NQNRGVHLLH IRSDFLTLFL FTSALLLRYK DSEEDFIIVQ TPLFGVHTDP NLFAISDTNK EMLEKSRNGV VSYLHPK
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