Gene PICST_33804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33804 
Symbol 
ID4840949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp522843 
End bp523553 
Gene Length711 bp 
Protein Length236 aa 
Translation table12 
GC content37% 
IMG OID640392264 
Productpredicted protein 
Protein accessionXP_001386692 
Protein GI150866930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA ATTTGATCTC AATTTTCTCG TTGGTATTAT TGTGCCACAA CTTGGCACTT 
GCCAAAGATT CACTAACACG TAAGGAAAGT CTTGAAATTT GTGAATCAGT GTCACTGCTG
GACAATGAGC CGACTTCGCA GCACAACTGT TCTGGTGAAA ATACCGTCGT TGGATTTGAC
AACATTTCAT ATGAAGATTT CATTAACATT ACTGAAAATC CTAATTACAA GGATGGAAAG
TTGATTACAT TGCTCAACGA ATCGGTTACC ATTTCAGATT CACATACAGA CCTGTTTTTG
CCGAATAGTA TCAAAGATAA TAATGTACAT GATCAAGAGC AATCGTTAGT GGAACTGTAT
ACTGATATAA TAGAGGCATT CAAAGTTTAC TTCGGTTTCA AAGAGAATTC ATGTTGGACA
CGGAAGACTG TTGTGGTAGA TGAGGAAACA GGCAGTTACT ACCACCTCAT ACAATTAGAT
GTGAAAGGGC ATGATTGTGA TCCTTCTGCA CAATTTTTGG CCATCATCGA TGAAGTAGAG
AAGATGCTTG AAAGGTTCGA ATACTTTGAT GCTTCATGGT GTATTAATAA TACAATTGAT
GGAAGTTTAG AAGCATATGT TCAGCATGGA GTTAATACCA TTTCATTCAC CTCTTGCAAT
AACTATGGAT TCTATAGAGG CAAGAGTGCT TTCAGGGATA CTGCTCATTA A
 
Protein sequence
MKLNLISIFS LVLLCHNLAL AKDSLTRKES LEICESVSSS DNEPTSQHNC SGENTVVGFD 
NISYEDFINI TENPNYKDGK LITLLNESVT ISDSHTDSFL PNSIKDNNVH DQEQSLVESY
TDIIEAFKVY FGFKENSCWT RKTVVVDEET GSYYHLIQLD VKGHDCDPSA QFLAIIDEVE
KMLERFEYFD ASWCINNTID GSLEAYVQHG VNTISFTSCN NYGFYRGKSA FRDTAH