Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33797 |
Symbol | |
ID | 4840807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 504933 |
End bp | 505712 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392122 |
Product | predicted protein |
Protein accession | XP_001386690 |
Protein GI | 150866928 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0365387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTCCT CCAATATACG TACGGCAGAC TCATCCAGTG GGTCATCGAA GCTTCCTGTT CCCAGACATA CATATTCCAA CTCGCTGGTG TCTAACATTT CCAGTATGAA TCCACAATCT CTCTCGAATT TAAAGCCCAA CAGGTCTGGT TCCAGCGCTG CCCGCCTAAC AAGAACCAAT ACCAATGCTA CCGATGCAAT TACAAATGCT AACAGCACTA TACTTGGAGA AGGTGCTCCT AGCTTGAGAA CAATAGATAT GGTGCCGAGC GCCAGACCCA GTGTCTCGTA TCTGGACAAA CTCTGGACCC AAATCGATGT ACTTGATGAT GTGAAAAGTA TGGCTAATCA AGTACGGCTG AAGGGATCAT TTTTCAACGA CAAGTTCAAC CAAGAGTTGA CGAAGTTGAA AGAACAACAG AATAAATTGT TAGAAACAAT GTCGTCACAG CATTTCAGCG ACATAGGCAG AAGTAGACTG AACCAATTAG TAGCGGCGTC GATTAAGTCT CCCAGCTTAG CTTTGCACTC TACAGGTGGA CTTAAGGGTG GCTTGTTGCC GTCGGACAAA GATGAAATAG TAGATAAAGA CAAGCTCAAA CAGGAAAAGT TGGATGAGTT CTTTGGTGAC GAGCAAGGTA CCAAGAGCTC TCGAGATATT CTTTACAGAA AACAGAATTT CGACGAGATG AACAAATATG TGGATCAGAT TAAAGACGAT TTGGTCAATG TGGGAGAGTC TATGAAGCGC TTTGACGAGA CAACAAGAGA GATATGGTAG
|
Protein sequence | MSSSNIRTAD SSSGSSKLPV PRHTYSNSSV SNISSMNPQS LSNLKPNRSG SSAARLTRTN TNATDAITNA NSTILGEGAP SLRTIDMVPS ARPSVSYSDK LWTQIDVLDD VKSMANQVRS KGSFFNDKFN QELTKLKEQQ NKLLETMSSQ HFSDIGRSRS NQLVAASIKS PSLALHSTGG LKGGLLPSDK DEIVDKDKLK QEKLDEFFGD EQGTKSSRDI LYRKQNFDEM NKYVDQIKDD LVNVGESMKR FDETTREIW
|
| |