Gene PICST_33797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33797 
Symbol 
ID4840807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp504933 
End bp505712 
Gene Length780 bp 
Protein Length259 aa 
Translation table12 
GC content44% 
IMG OID640392122 
Productpredicted protein 
Protein accessionXP_001386690 
Protein GI150866928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0365387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCT CCAATATACG TACGGCAGAC TCATCCAGTG GGTCATCGAA GCTTCCTGTT 
CCCAGACATA CATATTCCAA CTCGCTGGTG TCTAACATTT CCAGTATGAA TCCACAATCT
CTCTCGAATT TAAAGCCCAA CAGGTCTGGT TCCAGCGCTG CCCGCCTAAC AAGAACCAAT
ACCAATGCTA CCGATGCAAT TACAAATGCT AACAGCACTA TACTTGGAGA AGGTGCTCCT
AGCTTGAGAA CAATAGATAT GGTGCCGAGC GCCAGACCCA GTGTCTCGTA TCTGGACAAA
CTCTGGACCC AAATCGATGT ACTTGATGAT GTGAAAAGTA TGGCTAATCA AGTACGGCTG
AAGGGATCAT TTTTCAACGA CAAGTTCAAC CAAGAGTTGA CGAAGTTGAA AGAACAACAG
AATAAATTGT TAGAAACAAT GTCGTCACAG CATTTCAGCG ACATAGGCAG AAGTAGACTG
AACCAATTAG TAGCGGCGTC GATTAAGTCT CCCAGCTTAG CTTTGCACTC TACAGGTGGA
CTTAAGGGTG GCTTGTTGCC GTCGGACAAA GATGAAATAG TAGATAAAGA CAAGCTCAAA
CAGGAAAAGT TGGATGAGTT CTTTGGTGAC GAGCAAGGTA CCAAGAGCTC TCGAGATATT
CTTTACAGAA AACAGAATTT CGACGAGATG AACAAATATG TGGATCAGAT TAAAGACGAT
TTGGTCAATG TGGGAGAGTC TATGAAGCGC TTTGACGAGA CAACAAGAGA GATATGGTAG
 
Protein sequence
MSSSNIRTAD SSSGSSKLPV PRHTYSNSSV SNISSMNPQS LSNLKPNRSG SSAARLTRTN 
TNATDAITNA NSTILGEGAP SLRTIDMVPS ARPSVSYSDK LWTQIDVLDD VKSMANQVRS
KGSFFNDKFN QELTKLKEQQ NKLLETMSSQ HFSDIGRSRS NQLVAASIKS PSLALHSTGG
LKGGLLPSDK DEIVDKDKLK QEKLDEFFGD EQGTKSSRDI LYRKQNFDEM NKYVDQIKDD
LVNVGESMKR FDETTREIW