Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33767 |
Symbol | |
ID | 4840933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 435132 |
End bp | 436481 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640392248 |
Product | predicted protein |
Protein accession | XP_001386478 |
Protein GI | 150866771 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.539804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.198679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAA TAGCCTTGTC TATAATCGAG AAGCTAACGA CAAGCTACTT AAGAGGATTA GAGACAAAGG ATCAAGATTC GTCATTAAAA AGAAACAAAG AAGATGTCCA TCTAGCCAAA TATCTTGCAA AGGATTCCGT CATATTCGAC CAACTGCCAT CTGAATTACT TTACTTCAGC TTAATAAAAG AAAAAGAAAA ATCGGAAATA CTCTTCGAAG ATAAGAGTGC CTTGAAACAG GTGAATGTTC CATTGGAACA GTCGAAGAAA GTCGCAAATA AACAAAAACA AGGAAAGAAA AAGAAGAATA GTAAAAATCA TGAAAAGGAT GTAAGCCAGT TGATTGGAGG AAGTTTGAGT TATGGGTACG AACAATTTAG CCCTCCCAAG CAAGAGGAAA TATATCTGTT GGAAAATATG CTTCGAGCTA TTGAATATCT CGTGAGAGAA AAAGGCAAAC CATTGGAAGA TTTCAAAATG CTTTCCCTAA GAAGAAATTT ACATTTATTA ATGACTATTC CCATTTCAAA GCAAACAACC AGCTTTAATC TTATCTACTG GAACGGTCTC ATATTCCTTT CATATGATTG GAAATCATCT GAGAAATCAA AAGAAACCAG AAAAGAAAAT GCCAGCGATA AGAGAGCCGA TAACTTAAGA CTTCTTCAGT ATACTGGATT TGCATTTGAG AGGCTCATCA CATCATCACC GGCACTGGTG AGTTTCGATG ATAATAGTAT CACTTCTTTC TACAGCTTGG TCAGCCACAA AGTGGGTGAA ATTCCTATCC ATTTTACAGC AGAGATAGAT GCATGCAAGG ATATTACAAA GGACGGACTC TCCAACTACA TTGAATTGAA GGCTAGAGCA ATCCCTTCCG GTCCCAAAGG GAGAGCCAAT AGCTCCTTTC AAAGGAAGCT ACTTTCAGCT TATTGTCAAA ACAAGCTAAT TGGAAGCCAG AATCTTGTAA TAGGATTCCG TTCTCCAGAA TTGAAGGTAT CGTCTATTAA AAGATATGAG ACTAATGAGC TTAACGGCAT TATCAATAAA GAACCAGTCT ATTTTACAGA AAATTCGACT CTAAACTGCT CCAAAATGGT GAAATGGTAC AAACTTGTGA TATCATGGAT TACGGAACAT AACCAAATAA CTACTGTAGA CCACGATGCC TCAGTTCCAT TGGCATATAG ACTAGAATTC ACTTTGAAAG ACAAAGTGAT GGAATCGTGC TTGGAAATTA ACCCTGTTGA AGAGCAAGAC GTCCAGAGTT TGATCAAAGA ATTGATTCCA CCATGGTTTC AGAAGTTTAT GAATGAGAAT AAGAATAAGA AACGAAATGA CTACAGATAG
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Protein sequence | MNSIALSIIE KLTTSYLRGL ETKDQDSSLK RNKEDVHLAK YLAKDSVIFD QSPSELLYFS LIKEKEKSEI LFEDKSALKQ VNVPLEQSKK VANKQKQGKK KKNSKNHEKD VSQLIGGSLS YGYEQFSPPK QEEIYSLENM LRAIEYLVRE KGKPLEDFKM LSLRRNLHLL MTIPISKQTT SFNLIYWNGL IFLSYDWKSS EKSKETRKEN ASDKRADNLR LLQYTGFAFE RLITSSPASV SFDDNSITSF YSLVSHKVGE IPIHFTAEID ACKDITKDGL SNYIELKARA IPSGPKGRAN SSFQRKLLSA YCQNKLIGSQ NLVIGFRSPE LKVSSIKRYE TNELNGIINK EPVYFTENST LNCSKMVKWY KLVISWITEH NQITTVDHDA SVPLAYRLEF TLKDKVMESC LEINPVEEQD VQSLIKELIP PWFQKFMNEN KNKKRNDYR
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