Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33758 |
Symbol | |
ID | 4840874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 409161 |
End bp | 410360 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640392189 |
Product | predicted protein |
Protein accession | XP_001386471 |
Protein GI | 150866767 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC CGTCATTAGC CTCTTTCCCG AAAAGAGAGT TGGAATTGAC TCCATTCTGT TCTCAGTTGG ATTTCATCAA CAAGGCCTTG CTTTCGCTTT CAAAACAGGA CTCATCAGTC AACAACTACA CGAACACGTC TCGTAGGTAC ACCAATCAAA ACCAGCAGAA CACGCATGCA AACTACAACA ACAACCAGCA AAACAAATAC GCTTTGGCTG CTGTTGCTGC CGCCGCGGCT GTCCAGCACC AACAGCTGAA CTACCTTCTT CAACAACATC AGCAAAATCA ACAAAATCAA AACCAACAAT ACCAAAGTCA AAACCAGCAG AATCAGCAGC AGCAGCTTCG CAATAACCAA TATTCACAGC AGTCACATCC TCAGTTCCAA CTGAATCAAC ACCAGCAACA ATATCATCAA CCACAGTATC AGCCGCAGCA ATATCAGCAA CAACGTCTGA ATCAACAACA ATTCCAAAAT CAACAGAATC AACAAAACCA GCAAAATCAA CAAAATTACC AACAGCTGCA ACAATTACAA CAGAACCAGC AAAGTCTTCA GAACTTCCAG CACCAGAATC TTAATAATTT TCAAAATCAG CAACAGCCTC CACAGGTATT TGGTTCTGAA CTCTCTGCCT CTTCTTCTGT TGCCTCTGAC TCTCAATCCA ACTCTACCAG TGCTGGAACA CCATTGACTG GCATTCCTCC TGCTCTTGAT TTGAAAAGCA ACTTCTTGAT GTTCAACGAA AGCTCGCACT CAATATCTTC TCCTACTTAT TCTAGCGCAG CTCAGCAACA GAAACCTCCG CAACTCCACT CCAAGTTATT TGACTCTCTG TCCAGCAACT CGTCTCCGAT TTTGCTTCCA CCGAACTCAA GCGCTTCCAA CAAGAACTCA CCTCCCAACT TGTTTCTCTC TACGCCTGTG ACTACACCTT TGAATGCTAC ACATTCTACT GCAACCGGCT CTCCATTGAC CAAGCCTACC CTTCCAGAAA CGTCTGGTGG ATTTCTCAAC TCACCACTGT TGCTTCCTAC TCTGACACCA ACCTCTGCGG GAGGTGCCAA CTGGAGCACT ACCAATTCTA GTGCTTCAAT CTGGGGTAAC ACTACCAATG GAGTGTCTGC TCTGTCTGCT AACTCTTCTA AGGGTAACAG CCATCTAATC TCCAGCTTCG GCAGCTCAGG AATGTGGTGA
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Protein sequence | MSDPSLASFP KRELELTPFC SQLDFINKAL LSLSKQDSSV NNYTNTSRRY TNQNQQNTHA NYNNNQQNKY ALAAVAAAAA VQHQQSNYLL QQHQQNQQNQ NQQYQSQNQQ NQQQQLRNNQ YSQQSHPQFQ SNQHQQQYHQ PQYQPQQYQQ QRSNQQQFQN QQNQQNQQNQ QNYQQSQQLQ QNQQSLQNFQ HQNLNNFQNQ QQPPQVFGSE LSASSSVASD SQSNSTSAGT PLTGIPPALD LKSNFLMFNE SSHSISSPTY SSAAQQQKPP QLHSKLFDSS SSNSSPILLP PNSSASNKNS PPNLFLSTPV TTPLNATHST ATGSPLTKPT LPETSGGFLN SPSLLPTSTP TSAGGANWST TNSSASIWGN TTNGVSASSA NSSKGNSHLI SSFGSSGMW
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