Gene PICST_33753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33753 
Symbol 
ID4840871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp399099 
End bp399986 
Gene Length888 bp 
Protein Length295 aa 
Translation table12 
GC content39% 
IMG OID640392186 
Productpredicted protein 
Protein accessionXP_001386666 
Protein GI150866914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG GCAAGACTTC TGCTCGCCTG GTCACAAAGG CCTTGAATAA CGACAAACGT 
GCAAACGAAT ATCTCAAGCA TAATCCTGTG AAAAATGAAG AAATCTACTT GATCCACAAA
AGTACTTTGA AATCGGTAGA TTTGAAGGTG TTTTCTTTGG ATAACTACGA CGATTGGGCA
AAAGGCAAGG TTGAAAAGCT CAATTGTCTT CCAGTAACTG AATCCAGAAA ACAGAGTTTT
CTATCCAATA AATATGCTAG GATAAAGAGT CTATCTACGA AGAGTTCGTA TAAGGTGTTC
AAGAAGAGGT ATGATTCCTA TCGCAAATAT ACAGTTACTG GTGAGGAGGG TGATATTATA
TTGTTAGACC ACCTAATTTT GCCTATTTCG GATTTTCAGT ACGGCGACCA CGTCTATAGA
TGGATTTTCT TCAATTCCCT GTTAGCAGAC GGCAAATACA GCTTCAGATA TGTGCTCTAC
AAACTAGATG AAGACCAGCA ATCACTATTC GATAATAATA AAATCAGCAG TGACCAAAAC
AGTCGACTAT CTATCCTGAA TCCATTACTC AAGAATTCAA TAAGCCGCTT TATTTCTGAA
GATGACCGCT TGTTTGCAAC CAAGTACAAG CCGAAGAACA ACCCCATGCG GTTGGCTGAG
TTTGAACACA ATTTCAGCCG TGAATACGAA AAATCACTCC AAGCCTCCCT GTACCTAAAA
GTCTTTAAAT CCCGTCGGAA TTCAAACGAA GAACTCCTAC GAGATCATGA GATCTTAATT
AATTTGGCGA TAGTATTCAA ATTCATTCAA GACGGTAAAC TCAGCAAGAG AAGCACGCAA
CGAAGCTTGC AGTACACCAG TAAAATGGGT GTCAAGACTC TATTTTAG
 
Protein sequence
MTIGKTSARS VTKALNNDKR ANEYLKHNPV KNEEIYLIHK STLKSVDLKV FSLDNYDDWA 
KGKVEKLNCL PVTESRKQSF LSNKYARIKS LSTKSSYKVF KKRYDSYRKY TVTGEEGDII
LLDHLILPIS DFQYGDHVYR WIFFNSSLAD GKYSFRYVLY KLDEDQQSLF DNNKISSDQN
SRLSISNPLL KNSISRFISE DDRLFATKYK PKNNPMRLAE FEHNFSREYE KSLQASSYLK
VFKSRRNSNE ELLRDHEILI NLAIVFKFIQ DGKLSKRSTQ RSLQYTSKMG VKTLF