| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33737 |
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| Symbol | |
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| ID | 4841062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 364115 |
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| End bp | 365281 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640392377 |
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| Product | predicted protein |
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| Protein accession | XP_001386657 |
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| Protein GI | 150866906 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.605326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGGT GTAACCGTCT AGTTGTGCGA TCGGGTTTGC GAAGATCTTA CTCTTCAATT
TCTTCTTCCA AGTACGAAGT GCAGTTGTTT AATGCTACTG AGAATATCAA TAAGCTCTTG
GAGACCCATG ATCGTTCTTC ATATATATTA GCACAGTACG TTCCCGAGCC AGCCCGAAAC
GCCTTCTTGG CTATACGGGC TTTCAACTTG GAGATCAATA AGATCAGCGA TGGTGGCAGC
AATACAGGCT CCGTCGCTTC CAAGGCATCT TCACAACTTT CCAAGTCAAT GGGAATCTCC
ACAGCAGACA TGAAGTTCAA GTTCTGGAGT GATTTAGTCG CCAGGGTGTT CACGGAAGAC
CCATATCTGG AAAAAGACAT CGGTGAACCC ATAGCCATAT TGTTGAGAGA TGCATTACGG
AACGACTTGA ACTTAGACGT TACTTATTTC CATCAATTCC TACAGACTAG AAGGCAATTC
TTGAAGTCCC CGACGTTCCA GACTGTAGAC GACATTTGTT CCTACGGTGA AGGAACCTAC
TCCCAATTGA ACTACCAGAC TCAAGCTCTA TTACTATCTC CGTCCATATC GCCTTCTGTG
ATTAGTCTTT TGGAACAATC AACATCGTTG CAGTCTAAGG TAAGTGATAT CGCTGCACAT
ATCGGGCAAG CCACAGCTGT CGGTGCCATG ATCTTGGGAA TGAACTACTA TGCTACGTCC
AGAAACCAGG TCACGTTGCC TGTGAATTTG ATGTCCAAGT ACGACTTGTC CCAGGAGTCA
GTGTTGAAAT TGGCCCAAGG ACACGTGAAA GAGAAGACAG AGGTAGATGC TATCAGAGAC
AAGTTGAAAA ATATCGTTTA CGAAACAGCC ACAACATCCA ATGATCATAT CCTTACAGCC
AGGGCCAAGT TATCACAATG CAAACAAGAG ATCAACGAGA TAGTCAGGGC CAACATGCAT
GACCAATTAC TTCAGAAGAA CTCCAAGCGT TGGCGGAAGT TCATGCCAGA TGTAATTTTC
ACTCCTTTCA TGGTAGCCAT TCCTACGACG TTGTACTTGA ACAAGTTAGA GAAACACGAC
TTTGATATTT ACCACCACAA GATGCAGCAG AAGGAATGGC GGTTGGCGTG GACTTCGTTC
AAGGACTACT ACCAGAGAAC GATATAG
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| Protein sequence | MLRCNRLVVR SGLRRSYSSI SSSKYEVQLF NATENINKLL ETHDRSSYIL AQYVPEPARN
AFLAIRAFNL EINKISDGGS NTGSVASKAS SQLSKSMGIS TADMKFKFWS DLVARVFTED
PYSEKDIGEP IAILLRDALR NDLNLDVTYF HQFLQTRRQF LKSPTFQTVD DICSYGEGTY
SQLNYQTQAL LLSPSISPSV ISLLEQSTSL QSKVSDIAAH IGQATAVGAM ILGMNYYATS
RNQVTLPVNL MSKYDLSQES VLKLAQGHVK EKTEVDAIRD KLKNIVYETA TTSNDHILTA
RAKLSQCKQE INEIVRANMH DQLLQKNSKR WRKFMPDVIF TPFMVAIPTT LYLNKLEKHD
FDIYHHKMQQ KEWRLAWTSF KDYYQRTI
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