Gene PICST_33721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33721 
Symbol 
ID4841055 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp326614 
End bp327536 
Gene Length923 bp 
Protein Length187 aa 
Translation table12 
GC content45% 
IMG OID640392370 
Productpredicted protein 
Protein accessionXP_001386455 
Protein GI150866755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA ATTTCATGTT CTAATCATTC TTCTTATTTT GGAGAATATC TTAGCGTATT 
TGCATTGCTA TCTGCCTCTT ATCTTCCCTT TATTCATATT ATCTCTCCCT ATTCTCATCT
TCAGCCTGCC TCCAATTGCA TTACTGGTAA GTTCAATTCC GTTGAGGCGG GTCTGGTAAG
GGGTTACTTC TATTCTCAGA GATAGGACCA GTGGAACTTC ATTTGTAAAT TTGCAGCCAG
TACTGCACAT AATCGTCCGA ATGTTAGATT ACAATTCTAA CTTCAATCTT TGAATTTCAA
CATCTGATTC CTCCGATCTG TCTGGAGACT TCTCTGCAGC TCTATATCCT CGTCCAGTGT
AGTCCCGACC TTCTGATCCT CATCAGGTAC GAACTCTTCC TCATGCTTCT CGTCCTCTTG
GTCTTCTTCA TCCTCCGGTT GAGGCACCTC CCATTATCCC TGGATCCTCA GCGGCTGTGC
CCATGGAAAT CGTTTCTACG GATCCTGAGC CTATGCCTGA AGGTTGCAAT GACATAGAAG
TGGTCTCTGA TCATGAATTG TTTGATACTC CTGAGCGTTC TGGTACCTTT CCATGTCCCA
CACCTCTGAT CTCCACACGC TCCTCCATGG ACGTTCTTCT ATATCAGGAA GAATTTCCAG
ATCCGTCCGC GTATATGGAC ATGGTGGTGA TTGTTTCGGA TGATCTCTCT TCTTATCACA
ACTCGGAAAT TGAGGACACC TCCGACACTC TTCCGTCGTC TTACTTCTAC TGTGCAGACT
GTGGTTACCT CCACTCCTCC ACCTCCTCCT CTATCATTAT CTCGGGTAGT TCAATCCAAG
TCCCCTCAAT CCTCTTCCAT AATAGGCTAA TATTGAATCT GAGGCCAGTC TTAGACAATC
TGAACCACCT CACTGAACTT TGA
 
Protein sequence
MNSPPIALSV RTLPHASRPL GLLHPPVEAP PIIPGSSAAV PMEIVSTDPE PMPEGCNDIE 
VVSDHELFDT PERSGTFPCP TPSISTRSSM DVLLYQEEFP DPSAYMDMVV IVSDDLSSYH
NSEIEDTSDT LPSSYFYCAD CGYLHSSTSS SIIISGSSIQ VPSILFHNRL ILNSRPVLDN
SNHLTEL