| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33678 |
|---|
| Symbol | |
|---|
| ID | 4841052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 192966 |
|---|
| End bp | 195149 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640392367 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386633 |
|---|
| Protein GI | 150866890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGAG TGGTGAACCC CGCAATTTCG AAATCGACAG AAACTCGAAA ACTGAACTTC
ATCGAAACTG GGGATGTCAC CAAACTCTCC AAATCCTGCG ATTTCTGCAA ATCCAAGAAG
GTCAAATGTG ACCAGGTCAA GCCCATCTGC TCTTACTGTG TGAGACATAG CCAGGAATGT
GTCTATAGTA GAGTCAGAAA GCCAGGCTTG AGGCCAGGAT ACGGCCAGCA GGTATTTGAC
AGAATCAACG GTCTTGAATC GTTTGTAGAA AACTTTCATA CCTCCAGTAG TACAGAAATC
GAAAGTCTCA AGAACAGAAT CGAGGAGTTC ACCTCTAGAT TCGAAAGCAT AGAAGACAAA
CTTATCAACA TTGGCAATGC AAACATCACT AAAATATCTG CTACTGGTGA AGCTACAAAT
AATGTAAATG CAAATGACAA TGTTATTGTT AATGGCACTG TCAATAATGG CTTTGCAAAT
GTAAACCCCA GCAGTAGTAT TTCCAATAAA GAAACAATAG ATATGAACAG CATTGACAAT
ATCATTTCGT CTACTAGTAC AGCTTCAGGG AACCAAGAGG GTAAGTACTT GTATGGTGAA
TTGCCTACTA TACACGAGGC AACAATCTTG TTAGACATTT TTCAAGAAAA GATTCATCCA
ATATTTCCAG TCGTTGAGCA TTCAAAATTC AACACTTTGC TTGAAGAGTA TGAAACAGCC
CCAAGATCAA TACTTTTAGG AGCCATATTA TGTTCATTGC GATTTGCTGA TACATCACTA
ATTACCCATA GACAAAAGAA GGTGTATCAC GAGTCCATTT TCTCAAGGTT GCTAAATTCT
TGCTTTGTGG TAGGCACTGT AGAGGAGTTG CAAGCCATGA GTTTACTAGC TTTTGACCTT
TATAGCTACT CCAACAACCC CAAGACATGG AGTGTGATAT CGTTAATAGC CTCTGGAGTT
GTCCATCTTA ATTTATCTAG AGGCAGGCTT CAAACTTCTA TTCTTGAGCT ATACACGAGT
CGTTCTGGTG TATCCAAGAA TGTAACTTCC AGAACAGTAG CAAGCCAAAA AGTGGTGGAA
GAGAGAAAGT TGTTATTTTG GGAAATCTTT CAGCTTGATA TTCTTTCCAG TGCTTCAAGC
TCGTTTCCCT TGAAGATACC CTCTTCTGAA ATCGACTGTT CGCTACCATT AAAAAGGGAG
TTGTTTGAAA GTGCACAAAC GAATGAGGAC TATGAAAGAC TCAAGAGCTT GCCCACAAGA
ACACTCAATA AATATGTCAG TAATGTCAAC TATGACCACT ATGACTCAAA TTGTTTTCTC
ATTGAAATCT TGAATATTCT TGGAAAGATT CACATGTTCA TGAGGAAACC GCTTGATCTT
ACGAATATAA AGGAAATGTT GAATTGGCAG ATTAAGTTTT CTGAGTTGGA TAACGAAATC
CAAGTATGGA AAGCAACTTT GCCACGTATG TTTAACGATT TATTGGATAA CGAAAAGCTA
CCGTATGATA AAATAAATTC GTACAAGGAT ATACTCTTCC ATTCGTTATA CTATACTACG
ATTGTCAGGC TAAATTCTAG TGTGGGTTAT CCTTATCTTC AGCTTTCTAG TGGGCCTCTA
TCGTTCAAGG ATGCTCGTTC CAGGTGTTTG GATGCTGCCC AGCATGTAGT CAATTTTGCC
AAGAAGCTTT CGCAAATCTT TGAGGATGAT GCAGCTTTCC ACCAACGGAT TGGTCCTTAT
TATGCCTTCT CTCTTTGGGT TTCAGCACGT TTGCTTTTGG TGAATGCTAT CAATAGTGAC
TTGGAAATCC CTGCAGATGT CCAATACTTA ATATCTCTAT TGACACGTAT GGGGGACTCT
TGGGAGAGTG CTTCGAAGTA TGCTAACATA TTGAACTTCT TGATAAGTGA GTTGGAAACA
GAATCTCAAG AGAACTTGAA TATCATAAAC CATTTCTCTC ATGGCGGTAG TGAAGAGTCA
ATGTACCGCT CAGAAGATGC AAGCATCATC TCGGATATGA GACTCAATGC TTACAACTTG
GATGTGATTC TCTCTGAAAA GGTTGAAAAG TTTACTAATA GAAAGGGGGG CAAGGTGTCC
CCTAATAACC AGGCTGATAT CTCTAATTTT TTTGAATGGT TCAAGTTACC GTTTACTGAG
ATCAATACTC CAACATTGCA GTAG
|
|---|
| Protein sequence | MSRVVNPAIS KSTETRKSNF IETGDVTKLS KSCDFCKSKK VKCDQVKPIC SYCVRHSQEC
VYSRVRKPGL RPGYGQQVFD RINGLESFVE NFHTSSSTEI ESLKNRIEEF TSRFESIEDK
LINIGNANIT KISATGNQEG KYLYGELPTI HEATILLDIF QEKIHPIFPV VEHSKFNTLL
EEYETAPRSI LLGAILCSLR FADTSLITHR QKKVYHESIF SRLLNSCFVV GTVEELQAMS
LLAFDLYSYS NNPKTWSVIS LIASGVVHLN LSRGRLQTSI LELYTSRSGV SKNVTSRTVA
SQKVVEERKL LFWEIFQLDI LSSASSSFPL KIPSSEIDCS LPLKRELFES AQTNEDYERL
KSLPTRTLNK YVSNVNYDHY DSNCFLIEIL NILGKIHMFM RKPLDLTNIK EMLNWQIKFS
ELDNEIQVWK ATLPRMFNDL LDNEKLPYDK INSYKDILFH SLYYTTIVRL NSSVGYPYLQ
LSSGPLSFKD ARSRCLDAAQ HVVNFAKKLS QIFEDDAAFH QRIGPYYAFS LWVSARLLLV
NAINSDLEIP ADVQYLISLL TRMGDSWESA SKYANILNFL ISELETESQE NLNIINHFSH
GGSEESMYRS EDASIISDMR LNAYNLDVIL SEKVEKFTNR KGGKVSPNNQ ADISNFFEWF
KLPFTEINTP TLQ
|
|---|
| |