Gene PICST_33619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33619 
Symbol 
ID4841027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp23338 
End bp24048 
Gene Length711 bp 
Protein Length236 aa 
Translation table12 
GC content45% 
IMG OID640392342 
Producthypothetical protein 
Protein accessionXP_001386608 
Protein GI150866870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTGT TTCAATTAAT TTTCGCAGCC ACTGCCCTCT CTTCAGCCGT AAATTGGAAG 
AGAGCTAGTC CCTTTGGTGA TTTCACCGGT TCCAATTGTA ATAGTGCGTG CGTTAACGCT
GGGAAGACTC TTGCTAATTC TTGTGCAAAA GAACTCCAAG ACACTACCGA CTACGTGAGT
TATGTGAAAT GCTTCTGTAA TCAAAATAGT GGCTTCTGGG ACAATGTGGC CAAGTGTGAT
TGTGCTGATG GTGCCAATTC AGGTTTAACG GGTAGCGAAC TTAGAGCGCA AATTTGTGAA
GATTCGGGAA TTTTCTCTGC GTTGTCTGAG TTTTCAGATC TTAGCATCAA TTTCAGTCTT
ACTGATTCTC TAGATCTTAC TGCCACAAAC GAAAACACAG ATGCTACAGA AACCAATGAA
ACTGATGACT CTGACACTGA CTCTGACACT GGCACTGGCA CTGCTGAGGA CACTGACACT
GGCACTTCTG GAAGTGGTAC CGCTAAGTCT TCGGGAAGTG GAACAAAAGA CAGTTCTGGT
AGTGGAACAA CTACTAGCAC TGGCACATCT GCTACATCTG GAAGCACTAC AACTACTAGA
ACGACTGGCA CGTCTGCTAC TTCTGAAAGC GAGACTTCGG CAACCACCAA CGGAGCTAAA
GGTCTCACCT GCGGAATTCT GTTGTACTTA TTGGCTCTTT TTATTTTGTG A
 
Protein sequence
MLLFQLIFAA TALSSAVNWK RASPFGDFTG SNCNSACVNA GKTLANSCAK ELQDTTDYVS 
YVKCFCNQNS GFWDNVAKCD CADGANSGLT GSELRAQICE DSGIFSALSE FSDLSINFSL
TDSLDLTATN ENTDATETNE TDDSDTDSDT GTGTAEDTDT GTSGSGTAKS SGSGTKDSSG
SGTTTSTGTS ATSGSTTTTR TTGTSATSES ETSATTNGAK GLTCGISLYL LALFIL