Gene PICST_33614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33614 
SymbolTDH4 
ID4841024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp4787 
End bp5098 
Gene Length312 bp 
Protein Length103 aa 
Translation table12 
GC content51% 
IMG OID640392339 
ProductGlyceraldehyde-3-phosphate dehydrogenase 
Protein accessionXP_001386605 
Protein GI126140166 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGGC TTCATTTTGC AGGTTGCCAG GGCGCTACGT CCGAAGGTGA TGCTCTTGTC 
ATTGACGGTC ATGCTATCAA GGTATTCCAA GAGAGAGACC CAGCTGGTAT CCCACGGGGG
AAGTCTGATG TTGGCTACGT CAACTGGTGC CTTTACAATA TTGGAAGGTG CCCAAAAGAA
CATGACAGTG CTGTGAAGAA GGTCATCATC ACTGCCCCGT CTGCCGATGC ACCTATGTTC
GCTGTTGGTG TCACTTCTGA CAAGTACACG CCAAACTTGG TCATTTCGAA TGCCTTTTGC
ACCACCAACT GA
 
Protein sequence
MARLHFAGCQ GATSEGDALV IDGHAIKVFQ ERDPAGIPRG KSDVGYVNWC LYNIGRCPKE 
HDSAVKKVII TAPSADAPMF AVGVTSDKYT PNLVISNAFC TTN