| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_16981 |
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| Symbol | RTF1 |
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| ID | 4840815 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 542934 |
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| End bp | 544640 |
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| Gene Length | 1707 bp |
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| Protein Length | 554 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640392130 |
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| Product | flippase |
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| Protein accession | XP_001386498 |
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| Protein GI | 150866786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0319066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAGCAGCCAG TTGAAGAATC GGAAATCCTT CAGAAGTCCA CGGCTGGAGT GTCTTTGCTT
ATTTCAGTCC AATTCGTAAC AAAACTTTTT ACGTTTGTCC TAAATCAATT GTTGATTCGA
TATGTCTCGC CCTCGGTCTT TGCAATTTCA ATCTACTTGG AGTTTTTGGT TTCGACCGTC
TTATTCTTCA GCAGAGAAGG TGAACGACTT GCAGTTCAAA GGACAGAGAA TAGTAAAAGC
GATCGAAGTT CTGAACAAAA TAAAGGACTA AAATATAGAA CCAATTCTCG AGCTGGAACT
CTTCAAAGTA TCATTAATTT TGGTTTTATT CCCCTTATAA TAAGTGTGCC TATCTCGGCT
GCCATTTTCT ATTGGCAATA CAGTACTTCA CAGGTATTTG ATTCCGTTGT TCAGTTGCCT
TTTTATACTT TGACTCTCAG TCTCGTTGGC ACCTCCATAT TTTTCGAATT GGCTCTGGAA
CCAGCCTACG CTATTAATCA GTTCCAATTG AACTTTGGAA GACGCTCCCA ATTCGAAAGC
ACAGCTGTAT TCAATAGATG CTTGTTCACT TTCGGTTCAG TATATGTTTC AGCTAGTGTA
TTGCGGTTGC AAGGGAAAAC ATTTGACGGA GCTGCTGTGT TAGCCTACGC TTTCGGTCAA
TTTGCATATT CGTTCACCCT CTTTGTTTGT TACATCTTTA ACTTCAACAA GGAGAACAAT
AAAAGAAGTG CGGAAGAAAG GTTGACTTTT TCGATTCAGA AGATTAACCA AACAAAGAAC
ATCTATTACT TTTTTGATAG CAAGATTTTG GGTATATGGA AGGGCTTATT TGTACAGATG
TTGTTTAAGC AAGTCCTCAC TGAAGGTGAC AAACTCCTAA TGAACTATTT GTGTACTTTG
GAAGATCAGG CAGTCTATTC AATTATTACT AACTACGGCT CTCTCATCGC CAGACTCTTG
TTTCAACCTA TTGAAGAGTC TATGAGATTA CTCTTCACCA GAACACTTTC ATCGTCTCTG
CCCTCAGAAC TGGCGTTGAA GGACTCCTAT AGAACATTAT CGCTTCTTTC CATTTTCTAC
TTCAACTTAT CGTTGATGAT CATGTTAGCA GGGTTCACCA ATTCATCTTT CTTATTGAAA
CTCATTTTCG GTGGGTCGTC CAAATGGAAG GATACTAGCA TCTTCGAGGT GTTTCCACAA
TATACCATTT ACATTCCCTT CTTGGCTTTC AATGGGATCT TGGAAGCCTT CTTCAGTAGC
ATAGCCAGCA ACAAGGATAT CAGAAACTTC TCAATTTACA TGACAATTCT GACGGCAATA
TTTTTGGTTT CTCTGTACAT CTTTATTGTA CACGGTGGAT TGGGATTGAC TGGGTTGATT
TTGGCAAATA TAGTCAACAT GAGTTTAAGA ATAAGCTACT GCTACTTTGC CATTAGTCTG
TACTACAACA AGCACAAAAT AGCTCATGCT ACAGTATCTA TATTGAAATA TTCTAGTGCT
GGAATCATTG TTACTGTCTT GTTTGAAGCT ATACAACTCC TTGTACTTTC AGATGGCTCT
TCAGCGTACA CAACTACGTT CATTGGTTTG GCAAAGAGTT TCCTCAATTG CCTTGCTTGT
TTGCTAATGT TGTCATACTT GGAACGTCAC AACTTAAAGG GATTCATTTC ACAGGCACAG
CAGAGATTCT CAAAAAAGAA GGTAGAA
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| Protein sequence | EQPVEESEIL QKSTAGVSLL ISVQFVTKLF TFVLNQLLIR YVSPSVFAIS IYLEFLVSTV
LFFSREGERL AVQRTENSKS DRTGTLQSII NFGFIPLIIS VPISAAIFYW QYSTSQVFDS
VVQLPFYTLT LSLVGTSIFF ELASEPAYAI NQFQLNFGRR SQFESTAVFN RCLFTFGSVY
VSASVLRLQG KTFDGAAVLA YAFGQFAYSF TLFVCYIFNF NKENNKRSAE ERLTFSIQKI
NQTKNIYYFF DSKILGIWKG LFVQMLFKQV LTEGDKLLMN YLCTLEDQAV YSIITNYGSL
IARLLFQPIE ESMRLLFTRT LSSSSPSESA LKDSYRTLSL LSIFYFNLSL MIMLAGFTNS
SFLLKLIFGG SSKWKDTSIF EVFPQYTIYI PFLAFNGILE AFFSSIASNK DIRNFSIYMT
ISTAIFLVSS YIFIVHGGLG LTGLILANIV NMSLRISYCY FAISSYYNKH KIAHATVSIL
KYSSAGIIVT VLFEAIQLLV LSDGSSAYTT TFIGLAKSFL NCLACLLMLS YLERHNLKGF
ISQAQQRFSK KKVE
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