| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91075 |
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| Symbol | |
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| ID | 4840624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 759108 |
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| End bp | 761793 |
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| Gene Length | 2686 bp |
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| Protein Length | 828 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391939 |
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| Product | predicted protein |
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| Protein accession | XP_001386158 |
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| Protein GI | 150866522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.410085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGTGTCTATC ACCATACTCT TCCATCTACT ACACCATAGA GCTGCCATAG AGCCACTGCC
CATCTCTTCC CATCTTCCAA TTTCTACTAG TAGAATCGAA TATTTCACAT ATTTCATTCG
CATTTTTCCA GCCTGAGCCA TCGCTTTTTC ACCGTTACCA ATCACTGGTA TCCGCCAATA
CACCAATAAC CCCACAAATA TGGAAGTGAA TCTGCAGCCG GCTCCGCCCT TCCGGTCCGT
CTCCACAACG TCAAACTTAT CCATCAACTC ATCTTCCACG TCCATCACCA GAGTAGCACT
GGGCCCCCTT ATAGCCATGA ACCAAAATTT CAACAAGCTC CTGCTGCCTC TGGATCACTT
GTACTTCCAG TGCCAGCTGC TCAAACAGAA GCTAGGCCGA ATCCACGGGA TGGAGCCCTT
TTTAGCACTG GCCTACTCAG CGGCCGAACA ATGCGCTGAA CAACAGGCTC TCGCACTTTC
TCAGCAGATG GCTGAGACTA GCAATGGCAG AAACGATTTC CGGTCGCTGG TAGGCTCCTC
CGGTTTCTCC ATCCATTCTG ACCATCTGAA CTCATCAAAT TCGTTCGCCG CTAATAAGGA
CAAAACCTCA AACAACATCT TCACCTTCAC GGCTGGTATC TTGCCTGCCA ACATCTCTGT
AGATCCAGCA ACTCTTATGT GGAAGCTCTT TCAGCAGGGT GCTCCTCTTT GCTTGGCTTT
CAACGCTGTA GTACCCGGAT ACCAAATTCC AGTAGTCGGT AGTGATGATT TGAGAATCTG
CAAGAAGTCC GTGTACGACT TTTTGTTTGC CGTCAAGTCG CAGCTCAACT TCGACGACGA
CATGATCTTC ACTATATCCA ACGTCTTTCT GGATAGCACT GAGGATTTGC TCAAGATCAT
CAAAGTAGTG GACTCTGTAT TGAGTGTCAA GAAGGACAAT CCCCATTTCA GCTTTGAATT
GGAGTCGTCA CCATCGGCTG TCGGGGAAGT AATCATCTCC AACGAGCGAT CCAAAGTGTT
CAAGGAGATC ATTGACACCG AACGGAAGTA TGTCACCGAT TTGGAGTTGC TTTCTCGCTA
TAAGTCTGAG TTGGTCAATG CCGAATTGAT CCCCAATGAG CAAATACATT CGTTGTTCCC
TAACTTGAAC GAAATAATAG ACTTCCACAG AAGGCTATTG AATGGGTTGG AGTGTAATAT
CAATGTGCCC TATAAGTACC AGAGAATTGG TTCCATATTC ATTCACGCTG CTGCAGGGCC
CTTCAAGGCA TACGAGCCAT GGACTATTGG CCAGATGTCG GCAATAGACT TGATCTATAA
GGAATCCTCC AACTTGAAGA AGTCGTCTAC CTTGCTTGAT CCGGGCTTTG AATTGCAATC
GTACATTATC AAACCAATTC AAAGATTATG TAAATACCCC TTGCTATTAA AGGAGTTGAT
CAAGGCTTCG CCAGAGTCGT TAGATCCCTC CATCCCACCT TCGGCATCGT TTAACGAAAT
GATTGTTGCC AGAAATGCTA TGAAGGAAAT GGCCAACCAG GTCAATGAAG CTCAAAGAAG
AGCTGAAAAC GTAGAATACT TGCATCAACT AGTGAACAGG GTCAGCAACT GGCGTGGGTT
CAATTTGCGC GACCAGGGAG AGTTGCTACA CCACGGAGTG GTAGGAGTGA AAGACTCAGA
TACCGAGAAA GAATACGTAG CGTACTTGTT TGAGAGAATC ATTTTTTTCT TTGTTGAGAC
AGACAAGCCT GATCAAAGCA AGGATAAGAA GAAGATCTTA TCGTCTCGTA AGAAATCGTC
TGCCTCGTCG TCTACAGCTA ACTTGCTTGA GTCGATAACC AAAGCAAAGT CGCTTAAGCT
GTCACCGTTA GAGTTGAAGG GTAGAGTTTA CATCTCAGAG ATCTACAATA TATCTGCTCC
TTCAAACTTG GGATACTCTT TAGTGATATC GTGGTCAGGA AAGAAAGAAA GTGGATCTTT
TACTTTACGA TACAGAACCG ACGAAATCAG AAACCAATGG GAAACATGTT TGAGAAACTT
GAAGACCACA GAGATGAACT CGCAAATCCA GCGCAAGTTG AGAGACTCGC TGGGTTCTCA
GGATTCTTCG ATCTACGATG TTACAGCCTA CTCAACGAAT AATGCTTCAC CTAACAATAC
TCTCACAGGG TCGAATGAGA ACGGATCCAG CAGATCGTCC AACGGCTCTT CTTACCAACG
CCACCACTCG TCTTCGTCCA CTTTCAGTAT GATGAGACAG TCTCGATCCA GATCGCTAGG
TGGGCAAGAC TCTTCTACCA GATTATCTAC GTCGCTGGGA GTTCCTAACT ACAACAGTAG
TAATATCTCT ACACCTATCA CTCCTTCTAT TGAAGATTTT GGCAACGACA TCAGGATCAG
GTTGATTTAC AACACAACAG AAATTCCCGA TTGGCTCATT GTTAGCACCA CCATCCAGTT
TAACGAGTTG TACCTGAAGA TATCTGGCAA AATCGTTACC AGTGAAGTTG TCACGGATGA
TATCTTGGTC AACAAGTTGA AGTACAAGGA TGAGGATGGC GACTTTGTTG TGATGGACTC
CAACGACGAT TGGGTGTTAG CCATGGACAT GTTGAACGAG ATGAGTGAAA GCGACAGCAG
CGACAGCATT GGTATGAGAC GTGATTTAAC GATATGGGTT TCTTAG
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| Protein sequence | MEVNSQPAPP FRSVSTTSNL SINSSSTSIT RVASGPLIAM NQNFNKLSSP SDHLYFQCQS
LKQKLGRIHG MEPFLASAYS AAEQCAEQQA LALSQQMAET SNGRNDFRSS VGSSGFSIHS
DHSNSSNSFA ANKDKTSNNI FTFTAGILPA NISVDPATLM WKLFQQGAPL CLAFNAVVPG
YQIPVVGSDD LRICKKSVYD FLFAVKSQLN FDDDMIFTIS NVFSDSTEDL LKIIKVVDSV
LSVKKDNPHF SFELESSPSA VGEVIISNER SKVFKEIIDT ERKYVTDLEL LSRYKSELVN
AELIPNEQIH SLFPNLNEII DFHRRLLNGL ECNINVPYKY QRIGSIFIHA AAGPFKAYEP
WTIGQMSAID LIYKESSNLK KSSTLLDPGF ELQSYIIKPI QRLCKYPLLL KELIKASPES
LDPSIPPSAS FNEMIVARNA MKEMANQVNE AQRRAENVEY LHQLVNRVSN WRGFNLRDQG
ELLHHGVVGV KDSDTEKEYV AYLFERIIFF FVETDKPDQS KDKKKILSSR KKSSASSSTA
NLLESITKAK SLKSSPLELK GRVYISEIYN ISAPSNLGYS LVISWSGKKE SGSFTLRYRT
DEIRNQWETC LRNLKTTEMN SQIQRKLRDS SGSQDSSIYD VTAYSTNNAS PNNTLTGSNE
NGSSRSSNGS SYQRHHSSSS TFSMMRQSRS RSLGGQDSST RLSTSSGVPN YNSSNISTPI
TPSIEDFGND IRIRLIYNTT EIPDWLIVST TIQFNELYSK ISGKIVTSEV VTDDILVNKL
KYKDEDGDFV VMDSNDDWVL AMDMLNEMSE SDSSDSIGMR RDLTIWVS
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