| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91057 |
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| Symbol | IDH1 |
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| ID | 4840458 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 210775 |
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| End bp | 212341 |
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| Gene Length | 1567 bp |
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| Protein Length | 362 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391773 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | XP_001386057 |
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| Protein GI | 126139069 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.433771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CACTATTCGC CTGATCCACA ATGTTGAGAA CCACCCTCGT GCAAAAGGTA CGCAATTCTG
CTGGCACATC GTAGCGATGT GTTGTTTGTT TCTGGCTTCT GTAGTATTTC CCTCAAACTC
CGAACTCATC CCTGTTGTCG ATGAGACATG ATCGTGAAGA AATCGTACAA CAAATCGGCT
ATCACGTTTC AATTAAAGTG ATTAAAGTGA ATTCACACCA GTGGTACTAT TCCATAATGG
TACCGTAGTC AAAATAGAAC CTGTCTTCAA TTCTTCCATT TCAATTGTAT ACCTCAAATG
TGACATTGAG ATTTGATATC TCAGACCTTC CAAACCGTCG CACTTGTCTT CCAATACTAT
TACTACATGA TTCCACCAGT TGCACTCTCT ATTTCATTAT ACTAACCTCT TTAGAGCGCC
GTCCGTTCGT TGGCTACCTT CGCCTCGCCA GAATCTGTCT TGCCCAAGAA GTACGGTGGC
AGATTCACCG TCACCTTGAT TCCTGGTGAT GGTGTAGGAC AGGAAATCAC CGATTCCGTC
AAGACCATCT TCAAGGCCCA GAATGTCCCA ATCGACTGGG AAGTGATCGA CGTGTCCGGT
TTGGAAAGCT CTGGCAAGAA CGGTGTTACT GAAGCCGTTG AATCGTTGAA GAGAAACAAG
GTCGGTTTGA AGGGAATCTT GTATACTCCA ACTGGATCTT CCGCAAAGTC CTTAAACGTT
GCATTGAGAA AGGAATTGGA CATCTACGCC TCGCTCGTAT TGATCAAAAA CATCCCAGGT
GTCAAGTCCA GATTGGACGG TATTGACTTT GCCCTTGTCA GAGAAAACAC CGAAGGTGAA
TACTCTGGTT TAGAACATCA ATCGTACCCA GGTGTCGTTG AATCTTTGAA GATCATGACC
AGATTCAAGT CGGAAAGAAT CGCCAAGTTC GCCTTTGACT TTGCCAAGAA GAACAACAGA
CAGTTGGTCA CCGCCATCCA CAAGGCCAAC ATCATGAAGT TGGGAGATGG TTTGTTCAGA
CAAACTGTTA AGGATGTTGG TCAAGACTAC TCCGGTATCG AAGTCAACGA CTTGATTGTT
GACAATGCCT CTATGCAAGC TGTCGCCAAG CCACAGCAGT TTGACGTTTT GGTCACTCCA
AACTTGTACG GTTCCATCTT GTCCAACATC GGAGCTGCTC TTATCGGAGG TCCTGGTTTG
GTTCCAGGTG CCAACTTCGG TAGAGAATAC GCTGTGTTCG AACCAGGTTG TCGTCACGTC
GGTTTGGACC TTAAGGGCCA AAACACTGCC AACCCTACTG CCATGATCTT GTCGTCCGCC
ATGATGTTGA GACACTTAGG CTTGAACGAT GAAGCCGACA AGATCTCGGC TGCTACCTAC
GAAGTCATCG CCGACGGTAA GATCAGAACC AAGGACATCG GCGGAACTTC TTCCACCACC
GAGTTCACCA AGGCCATTGT TGACAAGTTG GCTTAAACGA AAAGCGTATG TACTTTCATA
TCTTTATAAT CATTACATAC TTAGTGCTAC TAGAATACAT TAAGACTGAA GAGGTTATAG
TAGTTAG
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| Protein sequence | MLRTTLVQKS AVRSLATFAS PESVLPKKYG GRFTVTLIPG DGVGQEITDS VKTIFKAQNV
PIDWEVIDVS GLESSGKNGV TEAVESLKRN KVGLKGILYT PTGSSAKSLN VALRKELDIY
ASLVLIKNIP GVKSRLDGID FALVRENTEG EYSGLEHQSY PGVVESLKIM TRFKSERIAK
FAFDFAKKNN RQLVTAIHKA NIMKLGDGLF RQTVKDVGQD YSGIEVNDLI VDNASMQAVA
KPQQFDVLVT PNLYGSILSN IGAALIGGPG LVPGANFGRE YAVFEPGCRH VGLDLKGQNT
ANPTAMILSS AMMLRHLGLN DEADKISAAT YEVIADGKIR TKDIGGTSST TEFTKAIVDK
LA
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