Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_91009 |
Symbol | |
ID | 4840496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 948749 |
End bp | 949339 |
Gene Length | 591 bp |
Protein Length | 144 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391811 |
Product | predicted protein |
Protein accession | XP_001386371 |
Protein GI | 126139697 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1358] Ribosomal protein HS6-type (S12/L30/L7a) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.37094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTCCATACCT GTCGAAGAAG TCTATTATAC TAAAATGTCT GACGTTGAAC AAGAACAAAT TGTCGAAGAA GTTGCCGTTG AACAAACCGA AGCCGGCTCC ATCTCCATCG AAGATGCCTT GAAGGTCGTC TTGAGAACCT CTTTGGTCCA CGACGGTTTG GCCAGAGGTT TGAGAGAAGC TTCCAAGGCT CTTTCTAGAA GAGAAGCTCA ATTGTGTGTT CTCTGTGACT CTGTCACCGA AGAATCCATC ATCAAGTTGG TTGAAGCTTT GTGTAACGAG CCAGAAGAAA AGATCCCATT GATCAAGGTC TCTGACGCCA AGTTGTTGGG TGAATGGGCT GGTCTCTGTC AATTGGACAG AGAAGGTAAC GCCAGAAAGG TCGTTGGTGC CTCTTGTGTT GTCGTCAAGA ACTGGGGTGC TGACTCTGAT GAAAGAAACA TCTTGTTGGA ACACTTCTCT CAACAATAAA TGAGCGGTTT AGCAGTTGGT TCTGCTGAAT TGCTGCCCTG AACATCTTGT CTTTGACGGG TGTTCTGAAA AGGTAGTGAT ATTTTGTATA GTATTAATAT TAATATAAAA TCCTATTTTT C
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Protein sequence | MSDVEQEQIV EEVAVEQTEA GSISIEDALK VVLRTSLVHD GLARGLREAS KALSRREAQL CVLCDSVTEE SIIKLVEALC NEPEEKIPLI KVSDAKLLGE WAGLCQLDRE GNARKVVGAS CVVVKNWGAD SDERNILLEH FSQQ
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