| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90941 |
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| Symbol | GTS1 |
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| ID | 4840651 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 365405 |
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| End bp | 367125 |
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| Gene Length | 1721 bp |
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| Protein Length | 444 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391966 |
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| Product | protein (LSR1 protein) |
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| Protein accession | XP_001386085 |
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| Protein GI | 150866468 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.225966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.576221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAATTCAACG GCGGAAAGAC ATCATCAAGG GCCAATTATA CTACGAGGTA GTTAGAATAA
GAAAGCAAAG GAGAAATACT GATCTATAGA CTATTCCGGT ACTTCCATCT GATATTCTTA
CGACTATAGA CTTTAACTGA ATTATTGAGT ATCAATTTTT CACTAGCACG TTTGGCACAA
GAATTTCCGA TAACTGCTTT TAAAATTTAC TACGTTTGCT TTGAATACTC TTGATAAGCT
TTACATATCT TTCAACACTT TTGCTATTTC ATCAGTTTGA TAAGTTCGTC AAATAAGTAG
GATCACAATT TCTAGCAATG TCCAGAAAAC AACAGCAGGA GATTGAAAAA CAGCTCATTG
AAATCGTCAA CAGTAGCAAG AACGAAAACA AGTGCGGAGA GTGCGGCTCG AGCTACCCAA
CATGGGCATC GTATAACTTG GGAATCTTTC TATGTGGAAG ATGTGCTTCG GTCCACAAGA
AAATCTTGGG ACCTCCCAAC AATAACATAT CCAAGGTGAA GTCCCTTACA TTAGACAAAT
GGAACCACGA ACAGCTTGAC CATTTACGTC GTGTGGGCAA TAAAAAGGCG AAAAAGAGGT
GGAACCCAAA GAGAGTACCA TTTCCTTATG ATGGAGCTGA CGATGTTGCA GCCGTAGAAC
AGTACATAAG AGACAAGTAC GTCATTGGAA AGTTCAGGGA TGACAATATC GAGGCAGCTG
ACTACGAAGA AGGCAGAGGC AGTAGGTACT CAGATGAGAG TGACTCTGCT TCACGTGTTA
GCATTAGAAA CGGAAGATCC AGAGCCAATT CAAGAGCCAC CTCGAATTTA ACTCCAGGAG
GAGGAAGACT GAGATCTGGC TCTAAGAACT TTGAGATTCC TCGTTTGTCT CATAGAAAGT
TGACTACTTT CGAAAATACC CAGTATTCGC AACAATTGCA CAAGATTTTG AACTATGGTT
ATACCAACCG TGACTCAGTA TTGGAGAGTT TGTTGTTGAG TGGAGGAGAA ATCGAATTGG
CTCTTGATAT CTTGGATCAG GACTCTAAAT TAAACCCCAA CCAGGACGAA ATTCCACCAG
AGCTTCCCAG AAGAAGACCT GGAGCACCCC CTACAACTTC TTTGATAGAC ACAGCTCCAA
CTACATCCGC CTCTACTCAA CAGGTCCAAC CACTGGAAGA ATGGTGGTCT ACAAATTCAG
GAGCTGCACA GTCTCAAGTT ACGGGTATTG CACAACCTCA GATCTACCAA TATACTGATC
CTATAACAGG ACAGGTTTCA TATGTCGATG CCAATGGTCA ACAGTATCTT GATCCTACCA
ATCCACAGCA CCAGCAGCAG TTGTTACAAC AGTCAAACCC GCAGTTGATA GCACAACAGA
CCAACAAGCA GAATATCTTG TCGTTGTACA ACCAACCCAA TCTGTTCACT ACTCCAGTTG
CTGTACCAGT TTCCCAACAA CATGCGCAAC AGGCCCAAAC GCAACAAGTC CAACCAACAC
AACAAGCCCA AGTTCAAGCT CAGCAACAAT ATATACAACA GCCACAACAG ATTGTACAGC
AGACTGGATA TATGCAACAG CAGCCAACGT TTGTGCAACA ACAGCAGCCG CAACAAAACC
AGCAGTTTGC TCCACAGTTT ACTGGATTCG GACAGCCTCA ACAACAGTCT TATAATCCAT
ACAATCAGAC TCAGCAGCAA AACCAGTTCA ACTGGAGATA A
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| Protein sequence | MSRKQQQEIE KQLIEIVNSS KNENKCGECG SSYPTWASYN LGIFLCGRCA SVHKKILGPP
NNNISKVKSL TLDKWNHEQL DHLRRVGNKK AKKRWNPKRV PFPYDGADDV AAVEQYIRDK
YVIGKFRDDN IEAADYEEGR GSRYSDESDS ASRVSIRNGR SRANSRATSN LTPGGGRSRS
GSKNFEIPRL SHRKLTTFEN TQYSQQLHKI LNYGYTNRDS VLESLLLSGG EIELALDILD
QDSKLNPNQD EIPPELPRRR PGAPPTTSLI DTAPTTSAST QQVQPSEEWW STNSGAAQSQ
VTGIAQPQIY QYTDPITGQV SYVDANGQQY LDPTNPQHQQ QLLQQSNPQL IAQQTNKQNI
LSLYNQPNSF TTPVAVPVSQ QHAQQAQTQQ VQPTQQAQVQ AQQQYIQQPQ QIQFAPQFTG
FGQPQQQSYN PYNQTQQQNQ FNWR
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