| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90881 |
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| Symbol | AFG2 |
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| ID | 4840734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 515775 |
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| End bp | 518322 |
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| Gene Length | 2548 bp |
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| Protein Length | 788 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640392049 |
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| Product | AAA+-type ATPase |
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| Protein accession | XP_001386295 |
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| Protein GI | 150866631 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.369927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TATTCTCGTG CTATACCATG TCGTCAAAGC AGCTGTCAAA GAAAAAACTG GCTGGAACTC
CGACACAGCC AACTCCTTCC AAAAAGGTCA AAATTCCCAA ACAGTTTATA GTGCGACCTA
ACTCTAACAG TTCCACGAAA TCATTATCGA GAGCATACTT GAATTCTGAG ATTTTCCAAG
CGTTAGAGTT TACCAATGGG ACTCTTTTGT TTGTTTCCCG AGCAGATAGT GGTGCCCCGG
GAGTTTTGGT ATCAGTTTAC TATGACGATA CTATCCTAGA CAAGAATATC ATTACTGTTT
CTAGTAACAT GAGAAACTTG GGAGGGTTGC TCTTGGGAGA CCGTGTGCAA TTCTCGAGAT
ATTTGCAGCA ACCGGAGTAT GCTAAATCGG TTTCGCTAGC CATAGAAGGG TTCAACGAAG
ATCTGTTTTC TGACGAAACG ATAAATTATA TTCGCAAAAC TCTTGACGAG ACTGGAATCA
TCTTTCCAGG ATTGAAGATA TCCATCAGCC TACCACAAGA AGGTTCCGAA GAAAAGACAA
CACAATTGCT GATTGTAGAT ATCAACAGAG GTGAAGATTT GGAAAAGGCT CTTCTGAAGT
TGCAAATTTC TGCAGATGAT ATAGATGATG AAAATGATGA TGATTGCTTC TCTCAGGTAG
GAACTGTTTC GCCAGCATTT TTGTTTCAAA GAAGCAAAAC TAGTGTTATT AAAAGTGTAG
AAGACCAGCC TTCACGTTCC AAATATCCTA ATTTGCCGGT ACAGATTGGC TATGCCAACA
TTGGTGGTCT TTCGAAACAA GTTGCTTTAT TGCAGTCTAC CGTAGAATTG CCGTTGAACA
ATCCTACACT TTTTTCAGAC TTTGGCATCT CTCCTCCTCG TGGTATACTT TTGCACGGGC
CACCGGGGAC AGGTAAGACC ATGCTCTTGA GATGTGTTGC CAGCGAAACC AATGCCCACA
TTCTTACAAT CAATGGACCC TCAATAGTGT CCAAGTATCT TGGAGAAACC GAAAATGCCA
TCAGAGACAT CTTTATAGAA GCCCGTAAGT ACCAACCGTC GATTATCTTT ATGGATGAAA
TAGACTCATT GGTGCCCAGT AGAAACTCAG ATGATAGTGG TGAAACGGAG TCTAGAGTTG
TTGCTACTCT ATTGACGATG ATGGACGGGA TGGGCGATTC AGGTCGAATT GTAGTTGTGG
CCGCGACTAA TCGTCCCAAT TCCATCGATG CCGCCTTGCG AAGACCTGGA AGATTTGATC
AAGAAGTAGA AATCGGCATT CCGGATGTGG ATGCAAGGAC GGACATCTTG CTCAAGCAGT
TTGCCAAGAT GAATGCTTCC AAATGTGATT TATCAGAAGA CGATATCACC TTGGTAGCTT
CTAAGACTCA TGGTTATGTA GGGGCTGATC TTACTGCGTT ATGCAGAGAA GCCGTCATGA
AGGCTATTGG CCGTGGATTG AAGGCTGGAA TCGCGCAGAC TCAACTCAAG GTCAATTTGC
AAGACTTGAC AGAAGCTTTG CCAGAAATTA GGCCTTCAGC CATGAGAGAA ATCTTCTTAG
AAATGCCCAA AGTATTCTGG TCCGACATTG GGGGTCAACA TGAGTTGAAA CAGAAGCTCA
TGGAAGTAGT GCAACTTCCA CTAGAGGCTG CAGACAGTTT CAAAGCTCTT GGAGTGCTGG
CTCCAAAAGG AGTTTTGCTC TACGGACCCC CTGGCTGTTC CAAGACGCTA ACTGCTAAAG
CTCTCGCAAC CGAGTCAGGC TTGAACTTCT TGGCTGTAAA GGGTCCCGAG ATCTTCAATA
AGTATGTTGG AGAATCGGAA CGGGCCATCC GGGAAATCTT CAGAAAAGCT AGAGCAGCCG
CTCCGTCAAT CATTTTCTTT GACGAAATAG ATGCCATTTC TGGAGATCGT GAGTCGGCTT
CAACTTCTGC TTCACAGCAT GTCTTAACTT CGTTGTTGAA CGAAATAGAC GGTGTAGAAG
AGTTGAAAGG GGTCGTCATT GTAGCTGCTA CCAATAAACC AACAGAAATT GATCCAGCAT
TGTTGAGACC CGGTAGACTA GACCGTCACA TATATGTGGC TCCTCCCGAC TACGAGGCCC
GTCTTCAGAT CTTGAAGAAT GGGTCTAAGA AGTTCAACAT CGTTCCCGAG GATGTTGACT
TGCTGGAGCT TGCTCTACTC ACTGACGGAT GCTCTGGTGC AGAAGTAGCT CTTGTATGCC
AAGAAGCTGG TCTTGCGGCT GTAATGGAGA GCAGAAATGC CAGCACAGTC CAAAAGAAAC
ATTTCGAACA TGCTTTGAAG GGCATTTCCA AGGGTATCAC TCTGGATATG ATTCGTTACT
ACGAGGAATT CGCCAATAGG GGAGGCTTGA ATGTGAAGAC ATAAAATACT ACAAATCAGA
CTACTCAGAG TAACGCTTTT GAATACTATT ACATCAATTT CATTATCAGC GTACTTTCCA
GCATACTACT GCATTATTTG AACTTTATAT TAGCATTGAA TCACAATTAT AACCTTAACA
TTTACATCGG AATACAGAAT TATCATAG
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| Protein sequence | MSSKQSSKKK SAGTPTQPTP SKKVKIPKQF IVRPNSNSST KSLSRAYLNS EIFQALEFTN
GTLLFVSRAD SGAPGVLVSV YYDDTILDKN IITVSSNMRN LGGLLLGDRV QFSRYLQQPE
YAKSVSLAIE GFNEDSFSDE TINYIRKTLD ETGIIFPGLK ISISLPQEGS EEKTTQLSIV
DINRGEDLEK ALSKLQISAD DIDDENDDDC FSQVGTVSPA FLFQRSKTSV IKSVEDQPSR
SKYPNLPVQI GYANIGGLSK QVALLQSTVE LPLNNPTLFS DFGISPPRGI LLHGPPGTGK
TMLLRCVASE TNAHILTING PSIVSKYLGE TENAIRDIFI EARKYQPSII FMDEIDSLVP
SRNSDDSGET ESRVVATLLT MMDGMGDSGR IVVVAATNRP NSIDAALRRP GRFDQEVEIG
IPDVDARTDI LLKQFAKMNA SKCDLSEDDI TLVASKTHGY VGADLTALCR EAVMKAIGRG
LKAGIAQTQL KVNLQDLTEA LPEIRPSAMR EIFLEMPKVF WSDIGGQHEL KQKLMEVVQL
PLEAADSFKA LGVSAPKGVL LYGPPGCSKT LTAKALATES GLNFLAVKGP EIFNKYVGES
ERAIREIFRK ARAAAPSIIF FDEIDAISGD RESASTSASQ HVLTSLLNEI DGVEELKGVV
IVAATNKPTE IDPALLRPGR LDRHIYVAPP DYEARLQILK NGSKKFNIVP EDVDLSELAL
LTDGCSGAEV ALVCQEAGLA AVMESRNAST VQKKHFEHAL KGISKGITSD MIRYYEEFAN
RGGLNVKT
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