| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90814 |
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| Symbol | MLS1.2 |
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| ID | 4840685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 444915 |
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| End bp | 446612 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640392000 |
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| Product | Malate synthase 1, glyoxysomal (MAS) (DAL7) |
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| Protein accession | XP_001386287 |
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| Protein GI | 150866625 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0778949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.869225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC AGGCCCAACC ACTCTTCAGC TCGCTTGCTG GTGTCCAGGT ATTGGCTCCA
GTCTCCAAGA CTCCAGAATA TGAGCCCTCT ACCACTACCC AGGCAGACAT TTTGACCAAA
TCAGCCTTGT CTTTTGTAGT TCTTCTTCAC CGTTCTTTCA ATTCCACTAG GAAACAGCTC
TTGGAAAACA GACAACTTGT TCAGGAACAA CTTGACCAGG GCATTCCACT TCTGTTTCTC
CAGGACGAAA CCATGACAAA GGTCAGAAAT GACCCAACCT GGCAGGGAGC CTTTCCTGCT
CCAGGTTTGA CCGATAGAAG AACAGAAATC ACCGGTCCTC CGGAGCGTAA GATGATAGTC
AATGCTCTCA ACACACCTGT CAAGACCTAC ATGAGTGACT TCGAAGACTC ATCTGCTCCT
ACTTGGGCCA ATGTCATCAC TGGCCAAGTC AACTTGTACG ATGCTGTCAG ACACCAGATT
GACTTCGTTA GTAAGGACAA TGGTAAAGCA TATAGAGTCA ACCAGTCCCA ACAGTTTCTG
ACTCCCACAC TTCTTGTACG TCCCAGAGGC TGGCACATGG TTGATAAGCA CATCTTAGTA
GATGGAGAGC CTGTGAGTGC CTCGATTTTG GATTTTGGCT TATACTTCTT CCATAATGCT
CACGAGCTCA TCAACCAGGG TAGGGGTCCA TACTTCTACT TGCCGAAGAT GGAGCACCAT
TTGGAAGCTA AGCTCTGGAA CGACGTCTTC AACGTAGCCC AGGACTCATT GGCCGTTTCT
AGGGGTACCA TCAGAGCTAC CGTTCTCATT GAAACATTAC CTGCTGCCTA TCAGATGGAA
GAAATCATTT TCCAATTGAG AAACCATTCG GCAGGATTGA ACTGTGGAAG ATGGGACTAC
ATATTTTCAA CTATCAAGAG ATTACGTAAC GACCCCTCTA AAATCTTACC CGACAGAGAC
CAGGTTACAA TGACGGTTCC TTTTATGAAA GCCTACTGTG AGCGTTTGAT AAACATCTGC
CACCGTAGAC AAGTCCATGC TATGGGAGGC ATGGCAGCTC AGATCCCTAT AAAGAATGAT
CCTGAAGCCA ACAAAGTTGC TATTTCCAAA GTCAAAAATG ATAAGCTCAG AGAAGCTACA
ATGAATTACG ACGGAACTTG GGTGGCTCAT CCTGCTTTGG CACCAATTGC CAACGACGTC
TTCAACGAGC ATATGCCCAC TCCTAACCAG ATCCACATTG TTCCCGATGA AGATGTCTCG
GAAGCCGATT TGTCCAACAC AGCCATTGCT GGAGGCAAGA TCACAACCGA GGGTATTCGT
AAGAATCTCT TCATTGCCCT AAGCTACATT GAATCGTGGC TCAGAGGTGT GGGATGTGTT
CCTATTAACA ACTTAATGGA AGACGCTGCT ACAGCTGAAG TGTCTCGTTT GCAATTATAT
TCGTGGGTGT TGCACCTGGT AAAGATGGAA GACTCTAACA AGACTGTGAC CCCCGACTTA
ATGAGCCTGA TATTAGAGGA AGAAGTCGAA AAACTCACTG AACAATTTGG CTCTAAGGGC
CGCAAGTTTA AAGAGGCAGC CAGATACCTT GAGCCAGAAA TCACTGGCAA GTCTGTGTCG
GAGTTCTTAA CAACCTTGAT CTATGACTCT GTAGTTACTG TTGGCAAGCC AATCGACTTG
GAAGCCTTGA AGGACTAG
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| Protein sequence | MTIQAQPLFS SLAGVQVLAP VSKTPEYEPS TTTQADILTK SALSFVVLLH RSFNSTRKQL
LENRQLVQEQ LDQGIPLSFL QDETMTKVRN DPTWQGAFPA PGLTDRRTEI TGPPERKMIV
NALNTPVKTY MSDFEDSSAP TWANVITGQV NLYDAVRHQI DFVSKDNGKA YRVNQSQQFS
TPTLLVRPRG WHMVDKHILV DGEPVSASIL DFGLYFFHNA HELINQGRGP YFYLPKMEHH
LEAKLWNDVF NVAQDSLAVS RGTIRATVLI ETLPAAYQME EIIFQLRNHS AGLNCGRWDY
IFSTIKRLRN DPSKILPDRD QVTMTVPFMK AYCERLINIC HRRQVHAMGG MAAQIPIKND
PEANKVAISK VKNDKLREAT MNYDGTWVAH PALAPIANDV FNEHMPTPNQ IHIVPDEDVS
EADLSNTAIA GGKITTEGIR KNLFIALSYI ESWLRGVGCV PINNLMEDAA TAEVSRLQLY
SWVLHSVKME DSNKTVTPDL MSSILEEEVE KLTEQFGSKG RKFKEAARYL EPEITGKSVS
EFLTTLIYDS VVTVGKPIDL EALKD
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