Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85407 |
Symbol | |
ID | 4840601 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 945086 |
End bp | 946234 |
Gene Length | 1149 bp |
Protein Length | 137 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640391916 |
Product | predicted protein |
Protein accession | XP_001386194 |
Protein GI | 126139343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.102777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CATCTCCAAC CAATCACGAA ATATCAGTAG CAAAATGAAC GGAGAAAGCT GGTATGTAAA TTTCAGATCC TTTGCTATCT CAAAACGGAA GAGATCAGAG TTTTCTTACA GTTAACGGAA CTGGGAGTAG ATGAAGATAA GAAGTATATG GAAGCCATGC GGAGAAGTTC AGAAGAATGG ATCACCAAAT AAATTGAAGG CCATGATGAA TATAATACTG CAAATTGTTA TTGTCTAAAT TCCATTAATC AATCACAGAT CTGGTATTGT ACCACAGCTT GATCTATCAG TCTATATGAT CTTCGATGAT CTAACTATTT ATCTCATTAT CTATTTCTAT CATATCATGG CTGCATAGCG TTTTATATCC TCGAATCATT TCATATCGTT CTTCCATATA TTCTATGGAT CTTATATCTA TCTTCGTTGT CTTTTCGAAG TCGTACAAAT ACTAACTAGA ACGTCAGGTT ATTTATTCTT GCGGTGATAA TCAACGCCAT CAACTTGTTT TCACAAGTTT TCTTCACCAT CATGTACTCC GACTTGGAGT GTGACTACAT CAACCCAATT GAGTTGTGTA ACAAGTTGAA TCCATGGTTC ATTCCTGAAT CCGGTTTGCA TGCCTTCATC ACTACTTTGT TCTTGGTCAA TGGCTACTGG TTCCCCTTCT TGTTGAACCT CCCCTTGTTG GCCTACAACG TCAACAAGTT CCTCAACAAG AACCATCTCT TGGATGCTAC CGAGATTTTC AGAACCTTGT CCAAGCACAA GAAGGAGTCT TTCATCAAGT TGGGTTTCCA CTTGTTGTTG TTCTTCTTCT ACTTGTACAG AATGATCATG GCATTGGTTT CCGACGATGC CTAGAAACGG ATGTAGTTTC TAGGAACATT GCAAATCTGG TACGACCTTT CTTGTAGCTG AAAGTTAGAT GATTGAAGAT TGTAAACTAT TAAGACATCG AAACTTCTAG GGCTACGTAA GATTTTGAGT TGTAAAGTCA TGAAAGTTTG CAATGCCCTT GTTGTCTAAT TGCTTAATGA TTAAATCATT GTTGTGTCCC ATCCTTGTTG AACGTTTCTG TTTACGTACA TAATGTAGTT AATTAGTTAA TTGTTAATTA TTATAATATT TGTTCTATTG TCGTTATCT
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Protein sequence | MNGESWLFIL AVIINAINLF SQVFFTIMYS DLECDYINPI ELCNKLNPWF IPESGLHAFI TTLFLVNGYW FPFLLNLPLL AYNVNKFLNK NHLLDATEIF RTLSKHKKES FIKLGFHLLL FFFYLYRMIM ALVSDDA
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