Gene PICST_85407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85407 
Symbol 
ID4840601 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp945086 
End bp946234 
Gene Length1149 bp 
Protein Length137 aa 
Translation table12 
GC content37% 
IMG OID640391916 
Productpredicted protein 
Protein accessionXP_001386194 
Protein GI126139343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.102777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CATCTCCAAC CAATCACGAA ATATCAGTAG CAAAATGAAC GGAGAAAGCT GGTATGTAAA 
TTTCAGATCC TTTGCTATCT CAAAACGGAA GAGATCAGAG TTTTCTTACA GTTAACGGAA
CTGGGAGTAG ATGAAGATAA GAAGTATATG GAAGCCATGC GGAGAAGTTC AGAAGAATGG
ATCACCAAAT AAATTGAAGG CCATGATGAA TATAATACTG CAAATTGTTA TTGTCTAAAT
TCCATTAATC AATCACAGAT CTGGTATTGT ACCACAGCTT GATCTATCAG TCTATATGAT
CTTCGATGAT CTAACTATTT ATCTCATTAT CTATTTCTAT CATATCATGG CTGCATAGCG
TTTTATATCC TCGAATCATT TCATATCGTT CTTCCATATA TTCTATGGAT CTTATATCTA
TCTTCGTTGT CTTTTCGAAG TCGTACAAAT ACTAACTAGA ACGTCAGGTT ATTTATTCTT
GCGGTGATAA TCAACGCCAT CAACTTGTTT TCACAAGTTT TCTTCACCAT CATGTACTCC
GACTTGGAGT GTGACTACAT CAACCCAATT GAGTTGTGTA ACAAGTTGAA TCCATGGTTC
ATTCCTGAAT CCGGTTTGCA TGCCTTCATC ACTACTTTGT TCTTGGTCAA TGGCTACTGG
TTCCCCTTCT TGTTGAACCT CCCCTTGTTG GCCTACAACG TCAACAAGTT CCTCAACAAG
AACCATCTCT TGGATGCTAC CGAGATTTTC AGAACCTTGT CCAAGCACAA GAAGGAGTCT
TTCATCAAGT TGGGTTTCCA CTTGTTGTTG TTCTTCTTCT ACTTGTACAG AATGATCATG
GCATTGGTTT CCGACGATGC CTAGAAACGG ATGTAGTTTC TAGGAACATT GCAAATCTGG
TACGACCTTT CTTGTAGCTG AAAGTTAGAT GATTGAAGAT TGTAAACTAT TAAGACATCG
AAACTTCTAG GGCTACGTAA GATTTTGAGT TGTAAAGTCA TGAAAGTTTG CAATGCCCTT
GTTGTCTAAT TGCTTAATGA TTAAATCATT GTTGTGTCCC ATCCTTGTTG AACGTTTCTG
TTTACGTACA TAATGTAGTT AATTAGTTAA TTGTTAATTA TTATAATATT TGTTCTATTG
TCGTTATCT
 
Protein sequence
MNGESWLFIL AVIINAINLF SQVFFTIMYS DLECDYINPI ELCNKLNPWF IPESGLHAFI 
TTLFLVNGYW FPFLLNLPLL AYNVNKFLNK NHLLDATEIF RTLSKHKKES FIKLGFHLLL
FFFYLYRMIM ALVSDDA