| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85406 |
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| Symbol | |
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| ID | 4840459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 219647 |
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| End bp | 222034 |
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| Gene Length | 2388 bp |
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| Protein Length | 780 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391774 |
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| Product | predicted protein |
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| Protein accession | XP_001386060 |
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| Protein GI | 150866451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.920544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCA AACTCAGTGC CACATTAAGG GGGCACGAGC AGGATGTCCG TGGAGTGGTT
GCACCTTCAG ACGAACTTGT AGTAACTTGC CTGAGAGATT CTACTACCAG AATCTGGTTG
CCACCATCAG ACAGCAAGCA ATCACGTTTT GTTTCTGATC GCACCGAGCC ATTGATCGTG
TTCCATTCGC CAAACAATAG TTTTATCAAT AGTGTGACCT ATATAGACTC TAAACAGCAC
GAACCACTCA TTGCCAGTGG AAGCCAGGAT GCCATTATTT ATTTGTCAGA AGTGGCTGTT
TCAGACCGAA AGCCCGGAGA CGACACGGGA AAATACCAAT TGATAGGCCA CGCCGGCAAT
GTCTGTGCTT TGGAATATAA AAACAACCAG ATCATTTCGG GCTCATGGGA TTGCACTGCC
AAGGTGTGGG ATTTGGATAC CTTATTGGTG AAGTACGATC TTGTTGGTCA CGAGTCCTCA
GTGTGGGATG TCAAGATTTT GGACAACGAC ACGTTTTTAA CATGTTCTGC TGATAAGAGC
ATCCGTCTCT GGAACGGAAA GAAAGAAGTG CAACGTTTCA GCGGACATAC AGATGTAATC
AGAAAATTGT TAGTGTTTCC AGATGGGTCA AGATTCGCAT CTGCTTCGAA TGACGGAACT
GTTAAACTCT GGGACTTGAA ATCTGGCCGT GTCTTGCAGA CATTGCACGG CCACGAATCG
TTTGTATATG ATTTGACTCT TTTGCCTAAT GGAGATCTTG TTTCTGTAGG TGAAGATCGT
ACCATTAGAG TTTGGAGAGA TGGCTCTATT TTGCAAGTCA TCACTTTGCC CTGTATCTCA
GTATGGTGTG TTGCAGCTCT CCCTAATGGC GATATAGTTG TGGGAGGCTC GGATAACATA
GTGAGAGTTT TCACGAGAGA CCTGTCTCGA ATTGCTTCAG ATGAAGAAAT TGCAGAGCTC
GTGGAAGCAG TACAACAATC AAGCATTGCT GAACAATCAT TGGACAATTT GAAGAAGACG
GATATACCTA GCTATGAAGC CTTGGAACGT CCAGGGAAAC AAGAGGGTGC AACCATTATG
GTGAAGAACC CATCTGGTGT GATAGAAGCC CATCAATGGT CGGGAGGGGA GTGGGTCAAG
ATTGGTGACG TGGTTGGATC AGCCGGTTCT GGACAGAAAA AGACTTACAA TGGCAAGGAA
TACGACTATG TTTTTGATGT TGACATCGAG GATGGTGCTC CGCCTTTGAA ATTGCCTTAC
AATGTGAACG AAAACGCCTA TACAGCAGCA CAGAGGTTCT TAGCCGAAAA TGATTTACCA
AGTTCATACA CTGACGAAGT GGTTAAATTC ATTAATAAGA ATACTGAAGG TTTCAGTATC
CAAGAAGCGG ATGAAGCTCC AACTTATGAC GCTTCGTTGA ATCCATATTC TGATAGTTAT
CAGCGGGAAC ATAACCAAGA TACCATTGCC TCATCTAAGC CAAGCTTGAA AGTCATTCCT
GAAACCACAT ATATTTCCTT CAAAGACTAC AAGGAAGCTC AATTGATTGC TGGATTAAAG
AAACTCAATT CAGAACAAGA TGAAAGTAAT CAACTATCTG AAAGCGATAT TAGCACCATC
TCTAGAAATT TGAAATTATT AACTTCTAAG GAGTCTTTGC AATTGATTGT TGAATATATT
CCAAGAATCA TAACTACGTG GTCTCCAGCA ACTAGATTGA TTGGTTATGA TCTTTTAAGA
ATTAGCATAC CTCGCGTGAC GACCGTTGAT TTATTGAGAT CAACTGAAGG TGCTGAGGCA
GTATTGAAAG CTATATCGTC TGGCTTAGAT GTAGCGGATG CCTCTACGAT TCCTTTGTTG
ATGATGATTT TGAAGACTTT GAATAACTTG ATTGGGAATA CTTTGTTTGT TCAATTGTAC
ATTGATCCTA ACGAGGACGG AACGTATACC TACAACAAGT TCTTCTTGGA CTTGCTATCA
ACATTGACCG CTAAGGTTAT AGACATAACT GAGAATGGCA AGTTCCACAA GCTCTATAAC
ACTACAGTTA CTACTATTGC AACTTTGTTG TACAATCTTT CCGTGTATCA TCTTCAAACT
TCTGGCTTGA AGAAGAATCC AAGGTCATCA GAATCGATTG TTCAATTCAC TAACGAAGTT
GGAGACCTTA TTGTTGAATC CAACAGCGAA GCTGCCTATA GACTAGCAAT AGCTTATGGC
AACTTGAGGT ATGCCAAGGC ATTTGAACCT GTACCAGAAT GGTTAAATAA GGCTGGAGAG
CTATATATCA GCAAGGGCGA GCAGAGATTT ATCGACTTGG CTCGCGATTT GCAAAGCTTG
TAAGGCTTAT TAAAAGTTGG TTTCTATTTT AATACACAAA CATTATGT
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| Protein sequence | MPFKLSATLR GHEQDVRGVV APSDELVVTC SRDSTTRIWL PPSDSKQSRF VSDRTEPLIV
FHSPNNSFIN SVTYIDSKQH EPLIASGSQD AIIYLSEVAV SDRKPGDDTG KYQLIGHAGN
VCALEYKNNQ IISGSWDCTA KVWDLDTLLV KYDLVGHESS VWDVKILDND TFLTCSADKS
IRLWNGKKEV QRFSGHTDVI RKLLVFPDGS RFASASNDGT VKLWDLKSGR VLQTLHGHES
FVYDLTLLPN GDLVSVGEDR TIRVWRDGSI LQVITLPCIS VWCVAALPNG DIVVGGSDNI
VRVFTRDSSR IASDEEIAEL VEAVQQSSIA EQSLDNLKKT DIPSYEALER PGKQEGATIM
VKNPSGVIEA HQWSGGEWVK IGDVVGSAGS GQKKTYNGKE YDYVFDVDIE DGAPPLKLPY
NVNENAYTAA QRFLAENDLP SSYTDEVVKF INKNTEGFSI QEADEAPTYD ASLNPYSDSY
QREHNQDTIA SSKPSLKVIP ETTYISFKDY KEAQLIAGLK KLNSEQDESN QLSESDISTI
SRNLKLLTSK ESLQLIVEYI PRIITTWSPA TRLIGYDLLR ISIPRVTTVD LLRSTEGAEA
VLKAISSGLD VADASTIPLL MMILKTLNNL IGNTLFVQLY IDPNEDGTYT YNKFFLDLLS
TLTAKVIDIT ENGKFHKLYN TTVTTIATLL YNLSVYHLQT SGLKKNPRSS ESIVQFTNEV
GDLIVESNSE AAYRLAIAYG NLRYAKAFEP VPEWLNKAGE LYISKGEQRF IDLARDLQSL
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