| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85400 |
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| Symbol | PAP1 |
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| ID | 4840620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 703131 |
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| End bp | 704882 |
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| Gene Length | 1752 bp |
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| Protein Length | 556 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391935 |
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| Product | Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase alpha) |
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| Protein accession | XP_001386148 |
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| Protein GI | 126139251 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5186] Poly(A) polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTCA GAACGTATGG TGTCACTGAT CCGATATCTA CAGCCAACCC CACGCCCAAG
GAAAACAGTC TCAATGATGC ATTGATTGGT GAACTCCGCA GTCGTGGATC ATTTGAGAGT
GAGCAGGCAA CGAAGAAGAG AGTGGAAGTC CTCACTCAAT TCCAGAAAAT GGTACAAGAG
TTTGTGTTCA CCGTTTCCAA GAAGAAAAAT ATGTCCGATG GGATGGCCAA GGATGCTGGA
GGTAAAGTGT TTACTTTTGG GTCTTATAGA TTGGGTGTTT ACGGCCCAGG CTCGGATCTT
GATACCTTGG TTGTCGTTCC CCAGCATGTA TCGAGGGAAG ACTTTTTCAC TGTATTCGCC
GAAATTATTC GTAAACGTCC AGAATTAGAA GAAATTGTAC CTGTTCCAGA CGCTTTTGTG
CCAATTATTA AGATTGAGTA CGATGGCGTC CCGCTTGATT TGATTTTTGC ATGCTTAAAT
GTTCCTAGAA TTCCTCTTGA TATGACTTTG GACGACAAAA ATCTTTTGAG AAATCTTGAC
GAGAGAGATT TGCGGTCCCT CAACGGAACA AGAGTCACGG ATGAAATATT GCAGTTGGTA
CCAAAACCGA CGGTATTCAA GCATGCTTTG AGATGCATCA AGATGTGGGC TCAACAGAAA
GCTGTGTACG GGAATGTATT CGGGTTTCCG GGAGGGGTGG CATGGGCAAT GTTGGTTGCT
CGTATATGTC AATTATATCC TAATGCTGTA AGTGCTGTCA TTGTTGAGAA ATTTTTCAAT
ATCTATACAA AATGGAATTG GCCCCAGCCT GTCCTCCTTA AGCCAATCGA AGACGGACCA
TTGCAAGTTC GTGTATGGAA CCCAAGGCTT TATGCCAATG ATCGTCTTCA CCGAATGCCA
GTTATCACTC CAGCTTATCC TTCGATGTGT GCCACTCATA ATATTACCAG CTCGACACAG
AAGGTGATTT TGTCAGAGTT AGAGAAAGGT GCAGAAGTTG TACGTCAAAT TAATTTGGGC
AAAAAGTCCT GGTCTGATCT CTTTGATAGA CACGATTTCT TTCATCATTA CAAATTCTAT
CTATGTGTAG TTGCAGCAAC AGTGGCCTCG GACGAAGAAC ATCTAAAGTG GACGGGTTTG
ATTGAGAGTA AGTTAAGGCA TTTGGTCCTC AAACTTGAGG TCACAGAAGG TGTAGAGTTG
GCACATCCAT ACGTAAAAGA CTTTTCCGAC TCGTACGTAC TTGGAGATGC AAACCCCTCT
GATGTCATTG GGGCGTATGG AACCTTGTCT GGTCAACCAT TTTTAGATAC ACTTGCCAAA
AGCGATGATA GCAATAAAGG TGAGAAGCAG ATCCACCTCA CCAAACTCTT TGTTGGATTG
AATCTTCAAC AGCTTAAGTC GGTGGACGGA GTAAAGAAAT TAAATATCCA ATATCCATGT
TCAGAGTTCT ACAATATTTG CAAGGGATCT GGATTTTATG ACGAAGCTAT AAACCATATC
AATATTAAGA ATGTGAAACT TGTTGACCTT CCTGATGACG TTTACGTTGA AGGGGAAGTG
AGACCTACTA AAAACAGCAA AAAGAGGAAA AAGGAAGTTA GCCTTGACAA GCAGAAGCGC
CCAAAAAGTA CAATTTCAAC TCCCCCAGTA TCTGTTAACG GGTCTGGTTG ATTCTTTTCC
TGTAGGAGGC TACGTATTAT GAGGTTACGG AAATCATTTA ATCTATTTCA GTAAATATAC
ATCCTTGACA GT
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| Protein sequence | MSVRTYGVTD PISTANPTPK ENSLNDALIG ELRSRGSFES EQATKKRVEV LTQFQKMVQE
FVFTVSKKKN MSDGMAKDAG GKVFTFGSYR LGVYGPGSDL DTLVVVPQHV SREDFFTVFA
EIIRKRPELE EIVPVPDAFV PIIKIEYDGV PLDLIFACLN VPRIPLDMTL DDKNLLRNLD
ERDLRSLNGT RVTDEILQLV PKPTVFKHAL RCIKMWAQQK AVYGNVFGFP GGVAWAMLVA
RICQLYPNAV SAVIVEKFFN IYTKWNWPQP VLLKPIEDGP LQVRVWNPRL YANDRLHRMP
VITPAYPSMC ATHNITSSTQ KVILSELEKG AEVVRQINLG KKSWSDLFDR HDFFHHYKFY
LCVVAATVAS DEEHLKWTGL IESKLRHLVL KLEVTEGVEL AHPYVKDFSD SYVLGDANPS
DVIGAYGTLS GQPFLDTLAK SDDSNKGEKQ IHLTKLFVGL NLQQLKSVDG VKKLNIQYPC
SEFYNICKGS GFYDEAINHI NIKNVKLVDL PDDVYVEGEV RPTKNSKKRK KEVSLDKQKR
PKSTISTPPV SVNGSG
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