Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85298 |
Symbol | |
ID | 4840536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 839899 |
End bp | 841244 |
Gene Length | 1346 bp |
Protein Length | 300 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391851 |
Product | predicted protein |
Protein accession | XP_001386171 |
Protein GI | 150866532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.239178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AACAATTGTC TGTTTACCTC TAGCCAGCAT CCAAAGCGAT CCCTCCGGAC CCTCATAGAC TCCAGCACCG CTCCGCTTAA TCCCGGCACT CTGCGGCATT CTCCTTTCCA TTTCCTACTT TTTCCAGCCT CAGGCCAATC TTGAGCTTTT TTTCCATCCG TTCAGCTTTT CAGCTCTCAG CTTTCTCCTC TTTCCCAGCT TTCCATTCAA CTTTTCCTTA TAGACAAAAT GACGGTGTCT GAGCAAGATA TCCTCGCATC GTATCCGCAA GTCAATGCGC CTTCCGAAAT CACCGGATAC ACTTCCAACT TGACCGAAGA ACAGAAACAA CAACTCGAAC AGTTTCGTAA GGAATTGACC GAATTGGGCT TTGTTGACCG TTTGGACGAT GCGTCCTTGT TACGATTCTT GAGAGCCCGT AAGTTTGATG TCGCCAAAGC CAAGCTCATG TTCGTCAACT GCGAGAAATG GAGAAAAGAC TTCGGTACCA ACACCATCTT GGAAGACTTC CACTACACGG AAAAGCCGCT TGTGGCCTCC ATGTATCCAC AGTACTACCA CAAGACAGAC AAGGACGGCA GACCAGTGTA TTATGAAGAA TTGGGCAAAG TCAACTTGCC AGAAATGTTG AAGATCACTA CCCAAGAAAG AATGTTGAAG AACTTGGCTT GGGAATACGA GTCCATGACT CATTACAGAT TGCCTGCTTG TTCCAGAAAG GCCGGAGTCT TGATCGAAAC TTCTTGTACT ATTATGGACT TGAAAGGGAT CTCGTTGTCC ACTGCCTACC AGGTTTTGGG TTACGTCAGA GAAGCCTCTG TTATTGGACA GGACTACTAC CCAGAAAGAA TGGGTAAATT TTATCTCATC AATGCCCCAT TTGGCTTTTC TACTGTTTTC AAGTTGTTCA AGCCATTTTT GGACCCAGTC ACCGTGTCCA AGATCTTCAT CCTTGGATCA TCATACCTGA AGGAATTGTT GAAGCAGATT CCTCCAGAAA ACTTGCCAAA GAAATTTGGT GGAAACTCCA CCGCAGTCGA ACAAGAGTTA TACTTGAACG ATGAAGGTCC ATGGAGAGAT ACACAATACA TCGGACCAGA AGGCGAAGCT CCTAGATCGT TTCCTCTCTA AGTGCTCCTA ATCTCATTGC TCCCGTACAA ACGTATTTGC TCAAAGGATA ATTCCACAGC CTTCTTTAGC ACGCTCGGTT CATATTATTG TTTTTGCTCC ATTGCTTCAG CTGCTATTCA TCACATCTTT GTACCACAGC TTACCGCTTT TTTTGTAGTT TTGGGTTAGT GCAGCTTCTG CGTTTTTATA CATTTAATAT ATAAGGTTAT CTTTAG
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Protein sequence | MTVSEQDILA SYPQVNAPSE ITGYTSNLTE EQKQQLEQFR KELTELGFVD RLDDASLLRF LRARKFDVAK AKLMFVNCEK WRKDFGTNTI LEDFHYTEKP LVASMYPQYY HKTDKDGRPV YYEELGKVNL PEMLKITTQE RMLKNLAWEY ESMTHYRLPA CSRKAGVLIE TSCTIMDLKG ISLSTAYQVL GYVREASVIG QDYYPERMGK FYLINAPFGF STVFKLFKPF LDPVTVSKIF ILGSSYSKEL LKQIPPENLP KKFGGNSTAV EQELYLNDEG PWRDTQYIGP EGEAPRSFPL
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