| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85255 |
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| Symbol | |
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| ID | 4840615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 690803 |
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| End bp | 692541 |
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| Gene Length | 1739 bp |
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| Protein Length | 542 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391930 |
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| Product | predicted protein |
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| Protein accession | XP_001386325 |
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| Protein GI | 126139605 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02345] T-complex protein 1, eta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.277299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTTTGTTT GACTAGTGCA GTTTACGACT ACGTAATAGT ATATATACTC ACATAAGCAT
AAATGTCGTT CACAAGTCAA ACTCCCACAA TTGTCGTCCT TAAAGAAGGA ACCGATACTT
CTCAGGGTAA AGGTGCCATC ATTTCCAACA TCAATGCCTG CCTTGCTATC CAAGACACCT
TGAGACCAAC GTTAGGTCCA TTCGGCTCCG ACATCCTCAT TGTATCTTCC AACGGTAAAA
CTACCATCTC GAATGATGGT GCCACCATTT TGAAACTTTT GGATATCGTC CATCCAGCAG
CTAAGATGCT AGTTGATATA TCACGTGCCC AAGACGCTGA AGTAGGTGAT GGAACAACAT
CTGTAACAAT CTTGGCTGGA GAGTTGCTCA AAGAAGCCAA ATCATTCATA GAAGATGGTG
TGTCCTCGCA TTTGATCACC AAAGGTTTGA GAAAAGCCTG TGAGTTGGCC GTAGAAAAAA
TCAACGAGCT TGCTGTGGAT GTAAAGAGAG AAAATGATGA GCAGTTCCGT CAGTTGTTGG
AAAAGTGTGC CACAACTGCC ATGTCTTCCA AGTTGATTAG TAATAATTCG ACTTTCTTCA
CCAAGATGGT CGTGGATGCT GTTTTGAGTT TAGATCAAGA AGACTTGGAT GAGAAGTTGA
TTGGAATTAA GAAGGTTCCA GGTGGAAGCA TGGAGGACTC TCTTTTTGTA GACGGTGTAG
CCTTCAAAAA GACCTTCTCG TATGCTGGCT TTGAACAACA ACCTAAAAAG TTCAGCAACC
CCAAGATTGT CAACTTGAAC GTAGAGTTGG AGTTGAAGGC CGAGAAAGAC AATGCTGAAG
TACGTGTCCA AGAAGTCAAG GATTACCAAG CTATTGTAGA TGCCGAATGG CAGATCATAT
TCAACAAGTT GGAAGCCATA GCTGCCACTG GTGCCAACAT AGTTTTGTCC AAGTTGCCTA
TTGGTGATTT GGCTACCCAA TTCTTTGCTG ACAGAAACAT ATTCTGTGCT GGAAGAGTTT
CTAGTGAAGA CATGGGCAGA GTGATCAAGG CGGTAGGAGG TAACATCCAG TCGACCTGTT
CCAACATTTT GCCAGAAGAC TTGGGTACCT GTGAAAGATT TGAAGAAGTT CAGATCGGTT
CCGAGAGATT CAATATTTTC CAGGGTTGTC CTCAAACCAA GACATGTACA TTAGTATTAA
GAGGAGGAGC CGAGCAGGTC ATTGCTGAGG TGGAGAGATC CTTACACGAT GCCATTATGA
TTGTCAAGAG AGCCGTCAGC CACAGCAGTG TCGTTGCTGG AGGTGGTGCC ATCGAGATGG
AGTTGTCTAA ATACTTAAGG GACTACGCCA AAACCGTTCC AGGAAAACAA CAGTTGATTA
TCGCCGCTTT TGCCAAAGCT TTGGAAATCA TTCCTAGACA GTTGTGTGAA AATGCAGGGT
TAGATGGCAT TGAGCTCTTG AACAAGCTCA GAAGTGCCCA CGCTAAGGGC GAAATCTGGT
ACGGAATAGA TTTCCAGAAG GAGTCTGTAG GGAACAACAT GAAGAGTTTC ATATGGGAGC
CAGCATTGGT CAAATTGAAT GCGATTCAAT CTGCTACTGA GGCCGCCACG TTGTTGTTGT
CTGTAGACGA GACCATCTCC AATAACTCCG ACGAAGGAGC TGCTGGTGGC AGAGGTAGAG
GTGCTTACTG AGGGAATACT AGGTAGACTT GTATAGACAA AGAAAATACC CGATGTAGG
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| Protein sequence | MSFTSQTPTI VVLKEGTDTS QGKGAIISNI NACLAIQDTL RPTLGPFGSD ILIVSSNGKT
TISNDGATIL KLLDIVHPAA KMLVDISRAQ DAEVGDGTTS VTILAGELLK EAKSFIEDGV
SSHLITKGLR KACELAVEKI NELAVDVKRE NDEQFRQLLE KCATTAMSSK LISNNSTFFT
KMVVDAVLSL DQEDLDEKLI GIKKVPGGSM EDSLFVDGVA FKKTFSYAGF EQQPKKFSNP
KIVNLNVELE LKAEKDNAEV RVQEVKDYQA IVDAEWQIIF NKLEAIAATG ANIVLSKLPI
GDLATQFFAD RNIFCAGRVS SEDMGRVIKA VGGNIQSTCS NILPEDLGTC ERFEEVQIGS
ERFNIFQGCP QTKTCTLVLR GGAEQVIAEV ERSLHDAIMI VKRAVSHSSV VAGGGAIEME
LSKYLRDYAK TVPGKQQLII AAFAKALEII PRQLCENAGL DGIELLNKLR SAHAKGEIWY
GIDFQKESVG NNMKSFIWEP ALVKLNAIQS ATEAATLLLS VDETISNNSD EGAAGGRGRG
AY
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