| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85246 |
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| Symbol | |
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| ID | 4840497 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 949918 |
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| End bp | 952729 |
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| Gene Length | 2812 bp |
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| Protein Length | 632 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391812 |
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| Product | predicted protein |
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| Protein accession | XP_001386372 |
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| Protein GI | 150866695 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5044] RAB proteins geranylgeranyltransferase component A (RAB escort protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTTCTCTT CAGATTCCTC GCCCCGCCAC TCGATCGTAT CCCAAACCAT TTATCTCCAC
TGCTAGCTTG CCCCTGCTGC ACCAAACACT CAATTCCAGA CCGTGTCTTA TCCACAGGCA
GTCACCGTAG TCATATCTAG AAAATTTTGA TAGTCATTCG GACAACCATC TAAGAACAGC
AACGAGCCGC TTGTGTCTGT CTGCTGTAGC TATCAATTTC AACACCCACC GAGTCCAGAC
ACTTCTTGCT TCATCTGGTT CTACTCGCAT TCATTGTGTT TCCAAGTTTA CTCCACAATT
GCTTTACCCC AGAGTCGTGG GCAATTGTAG TTCAATCGCA CAGCACAATT CACAAGTCTT
ACGAAACACA ACCCATAACA GGCTATTACT CATAACAGAT TCTTGTATTC GTAGCTGGAG
TTCTTGCCGG CTTCATCGAC ACCAACAGAT TTCTATTACT AATTATCACT GAATTGTCAT
TACAAATACA ACAGACTACA GAAATCCTTG CAATCACTAC AGAATTCACG AGCAATTCAT
AACACCATTC TCATCATTCA ATTCTTATCA ACATACAATC GATAAGGATT ACTTTTATTC
ATTTCACAAT TACTTTCATA TCTCCCATAT CCATATAACA CCCCATACTC ACCATCACAA
TGATGTCTCG AACTGAGAGA CGCAAATCTA TGGCTGAAAG AAGACCCAGC GTCTCGTACA
CCCCTCTGGT GATTCCCCAT TTGGCCGGCT TGGAAAAGCC ACAGGAACCT TCGTTGAAAA
TCGACCAGTG TGATGTTTTA ATCATGGGAA CGGGCCTAGT AGAGTCGATC CTTGCTGCCT
CTTTGTCGTG GCAAGGTGTC CAGGTGCTTC ATATCGACAA CAAGAACTAC TATGGAGACT
CGTCGTCGAC ATTGACCATC GACCAGTTGA AGAAGTGGTG TATGGAAGTG AATCTGGGTC
GTCTCCAGCA TTTCCAAGAT GCCCAGATCT ACATTCCTGG TGGTAAGTCG ACCAACAAGT
TCAACTCCAA AGACTACGGC ATCGACCTCA GTCCCAAGGT CATGTTTTGC AAGTCGGATT
TGTTGGCATT GTTGATCAAA TCTCGTGTGT ACAAGTATCT TGAGTTCCAG AGCTTGAGTA
ACTTCCACGT CTTTGAAAAC GACGATTTCT CCCAGAAAAT CACTACTCAG ACTTCGAAAG
AAGACATCTT CACCGACAAG TCGTTGTCGC TAATTACCAA GCGGAACTTA ATGAAGTTCC
TCAAGTTCAT TCTCACGGAC AACAAGGATC CTGTGAAGAA GAAGATCTTA GTAGATAACG
GCAAGGTCAA AGTCCAAGAC TTCTTGGTCA AGCAATTCAA CCTCGAGCTT CCACAGATCA
ATGAGTTGGT GTACTCCATC GGCTTGTGTA TCAATGAAGG CACCGAGACC AGAGAAGCCA
TGGCCAAAAT CAAGCGCTTC TTGGTCTCTT TCGATGTCTA TGGTAGCTTC CCAGTAATGG
TATCAAAGTA CGGAGGACCA GGAGAAATTT CCCAAGGTTT CTGTCGTAGT GCTGCTGTCG
CTGGAACAAC TTACAAGTTG AACACATCCC TTGTAGATTA TGACCCCAGA CTGAAGATCG
CCAAATTCAA CGACGGTAGT CATGTAAAGA TTAACGAAAA GTTAGTCATT TCGCCTACCC
AAGTGCCCAA GTTCTTGCAA TCCAATTATA ATGAAGTCAC CGAGAATCTC AAGCAATTCA
GCATAACTCG TTTGATCACT GTAGTCAGAA GGGATTGCAA GGAATGGATG GCAGAACAGG
ACTCTTCAGC AATTGTGGTC TTTCCTCCAC ATTCGCTTCC TACTAACAAC GAACAGAGCG
TCCAGGTCAT CATTCAAAAC GGTAATACCG GTGTTTGTCC CGAGGGTCAG TCCATCTGGT
TCAGTCACAC AAGTGAACAG GACTTGAATC GTGCCAAACA GGATTTGGAA AGCGCCTACG
AGAAAATGGA AGCCTCTTTG TTACGTGAAG CCAATGCTGA CTTAGAAGGT GCCTTTGATG
ACCAGGACTT TGTTCTCAGC GCACAGGGTA CTCCAGTATT TGTCAACTCG TTCAAGTTGG
GCGAATCCTT ACAAAACTTT GTGCCTAAGG AAAAGTTGGA AATAGTCTGT AAAGTAGGAT
ATGTGCAGAA GACATATGCC AATCCCGATT TGTCTAACAT CTTCCATGCC ACAGCTGAAG
ACAATGTCGT CTTGAAGAAC GTAGCGGATG CTGAAAATGA CATTCTTTTC TCCAACATGC
CTTCTGCAGA GTTGAGCTAT GATGGTAACA TCAGTGAAGC GAAGTTGATC TACCAGAAGA
TCACAGGCTC TGATGAAGAT TTCTTCGACG TAGATTTTGA AGACGATGAC GACGATTACG
ACAACAATGA CCCACATGAC TCAAGCAATT TGGGCTCCTC AACCACCTTA AAGTCGTCTA
GTTCCAATGG TGGTATTGTC GGAGGAGGAC CCAACTCTAG TTCTAATCTC CGAGCTCTAG
CTTCCGATAA CGAAGATGTC ATTGTAGACT CTTCAGATGA TGATGACCAC AATCCTTTCG
GAGCCGACGA GATGGAGTTG TAATTTAGCT ATAACAATTC GTATTAACGA AGTTGACGAG
GTTGCTACCG AAGCTTATTG CCATGTTCTT ATAGCTGCAT GTATTCTGCT TTGGCTCTTG
CCTGGATGAC AAGCCTGTAG TCGTTTTAAT TCTATTCAAA ATCAACTGTC TAAATAGCTT
GTTCTTATAT ACTTTGGTTG CTTTTACTGT TAATTTATTA ATCTACCGTT CG
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| Protein sequence | MMSRTERRKS MAERRPSVSY TPSVIPHLAG LEKPQEPSLK IDQCDVLIMG TGLVESILAA
SLSWQGVQVL HIDNKNYYGD SSSTLTIDQL KKWCMEVNSG RLQHFQDAQI YIPGGKSTNK
FNSKDYGIDL SPKVMFCKSD LLALLIKSRV YKYLEFQSLS NFHVFENDDF SQKITTQTSK
EDIFTDKSLS LITKRNLMKF LKFILTDNKD PVKKKILVDN GKVKVQDFLV KQFNLELPQI
NELVYSIGLC INEGTETREA MAKIKRFLVS FDVYGSFPVM VSKYGGPGEI SQGFCRSAAV
AGTTYKLNTS LVDYDPRSKI AKFNDGSHVK INEKLVISPT QVPKFLQSNY NEVTENLKQF
SITRLITVVR RDCKEWMAEQ DSSAIVVFPP HSLPTNNEQS VQVIIQNGNT GVCPEGQSIW
FSHTSEQDLN RAKQDLESAY EKMEASLLRE ANADLEGAFD DQDFVLSAQG TPVFVNSFKL
GESLQNFVPK EKLEIVCKVG YVQKTYANPD LSNIFHATAE DNVVLKNVAD AENDILFSNM
PSAELSYDGN ISEAKLIYQK ITGSDEDFFD VDFEDDDDDY DNNDPHDSSN LGSSTTLKSS
SSNALASDNE DVIVDSSDDD DHNPFGADEM EL
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