Gene PICST_85181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85181 
SymbolACO1 
ID4840474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp340000 
End bp342521 
Gene Length2522 bp 
Protein Length780 aa 
Translation table12 
GC content47% 
IMG OID640391789 
ProductAconitase, mitochondrial 
Protein accessionXP_001386080 
Protein GI126139115 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01340] aconitate hydratase, mitochondrial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.154992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.331758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTCTTTTTTG TTGATTTTCT TCAGAAAAGA CTCTTGTTTC GTCAATTGTA GATTGCAAAC 
ATGTTATCTA GAACTGCTGT CAGAGCCCCA CGCTCTATCC GTGGGTTGGC CACTGCTGGC
TTGACCAGAG ACTCCCAAGT GAACCAGAAC TTGTTGGAAT CTCACTCTTT CATCCAATAC
AAGAAGCAAC TCGAGAACCT CGACATCGTC AAGGCCAGAT TGAACAGACC TTTGACTTAT
GCCGAAAAGC TTCTCTACGG TCACTTGGAC GACCCTCACG GACAAGACAT CCAGAGAGGT
GTCTCCTACT TGAAGTTGAG ACCAGATCGT GTCGCTTGTC AAGATGCCAC CGCTCAAATG
GCCATTTTGC AATTCATGTC TGCCGGTTTG CCTCAAGTTG CCACTCCTTC CACTGTCCAC
TGTGACCATT TGATCCAGGC CCAAATTGGT GGTGCTAAGG ATTTGGCCAG AGCTATTGAC
TTGAACAAGG AAGTGTACGA CTTCTTGTCG ACTGCCTGTG CCAAATACAA CTTGGGTTTC
TGGAAGCCCG GTTCCGGTAT CATCCATCAG ATCGTATTGG AAAACTACGC CTTCCCAGGT
GCTTTGTTGA TCGGTACCGA TTCGCACACT CCTAATGCTG GTGGTTTGGG TCAATTGGCT
ATTGGTGTAG GTGGTGCTGA TGCCGTCGAC GTCATGGCCG ACTTGGCCTG GGAATTGAAG
GCTCCAAAGA TCATTGGTGT CAAGTTGACC GGTAGAATGT CCGGCTGGAC CTCGCCAAAG
GATATCATCT TGAAGTTGGC TGGTATCACC ACTGTCAAGG GTGGTACCGG TTCCATTGTT
GAATACTTCG GTTCTGGTGT TGAAACCTTC TCCTGTACCG GTATGGGTAC CATCTGTAAC
ATGGGTGCCG AAATTGGTGC TACCACCTCT GTCTTCCCAT TCAACAACTC CATGGTTGAC
TATTTGAATG CCACTGGTAG ATCCAACATT GCCGAGTTTG CCAACTTGTA CAAGAAGGAC
TACTTGTCTG CCGACGAAGG CTGTGAATAC GACCAAGTCA TTGAAATCGA CTTGAACACC
TTGGAACCAC ACATTAACGG TCCTTTCACC CCAGATTTGG CTACTCCAGT CTCCAAGATG
AAGGAAACTG CCATCAAGAA CGGCTGGCCA TTGGAAGTCA AGGTTGGTTT GATTGGTTCT
TGTACCAACT CTTCTTACGA AGATATGACC AGAGCTGCTT CTATTATTGA AGACGCTGCC
ACCCATGGCT TGAAGTCCAA GGCTATCTAC ACTGTTTCTC CTGGTTCTGA ACAAGTCAGA
GCCACCATTG CCAGAGACGG TCAATTGAAG ACCTTCGAAG ACTTTGGCGG TGTTGTCATG
GCCAACGCCT GTGGTCCATG TATCGGTCAA TGGGACAGAC AAGACATTAA GAAGGGTGAC
AAGAACACCA TTGTGTCTTC TTTCAACAGA AATTTCACTG CTAGAAACGA CGGTAATCCA
GCCACTCACG CTTTCGTCGC TTCTCCAGAA ATGACCACTG CTTTCGCCAT CTCCGGTGAC
TTGGGTTTCA ACCCAATTAC CGACACCTTG AAGGACGCTA ACGGAAACGA GTTCAAGTTG
AAGGAACCAG TTGGTGTTGG TTTACCAGTT AACGGCTACG ACCCTGGTGA AAACACCTAC
CAAGCTCCAC CTGAAGACAG ATCAACAGTC CAAGTGCAAA TTGCCCCAAC CTCCGACAGA
TTACAAAAGT TGACTCCTTT CAAGCCATGG GACGGTAAGG ATGCCGAAAG ATTACCAATC
TTAATCAAGG CCGTTGGTAA GACCACAACC GATCATATTT CTATGGCCGG TCCATGGTTG
AAGTACCGTG GTCACTTGGA AAACATCTCC AACAACTACA TGATTGGTGC TATCAACGCT
GAAAACGGTG AAGCCAACAA CGTCAAGAAC CACTACACTG GTGTATACTC TGGTGTTCCA
GACACTGGTG CTGCTTACAG AGATGCTGGC CACAAGTGGG TTGTTATTGG TGACGAAAAC
TTCGGTGAAG GTTCTTCCAG AGAACACGCT GCCTTGGAAC CAAGATTCTT GGGTGGTTTC
GCTATCATCA CCAAGTCCTT CGCTCGTATT CACGAAACCA ACTTGAAGAA GCAAGGTTTG
TTACCATTGA ACTTCACTGA CGTTGCTGCC TACGACAAAA TCCAACCAGA AGACGAAGTA
GACTTGCTCG GTTTGACTGA ATTGGCCCCT GGCAAGAACG TTATTCTCAG AGTCCACCCA
GCTGACGGTT CTGCCACCTG GGAAACCGAA TTGTCTCACA CTTACAACAT TGAACAAATT
GAATGGTTCA AGTACGGTTC CGCTTTGAAC AAGATGGCTG CCGTTGCTGC TGAAAAGAAG
TAAGTGATGT CTTGAGAGGA AATAGTTAAG TATCATTTCT TTTTGTTTAC CTATTAACAT
TCATTCGTAT TTATTTATTC ATTATTATAA TATGTACTTT GTTTAAATGA CGAGCATTGA
TC
 
Protein sequence
MLSRTAVRAP RSIRGLATAG LTRDSQVNQN LLESHSFIQY KKQLENLDIV KARLNRPLTY 
AEKLLYGHLD DPHGQDIQRG VSYLKLRPDR VACQDATAQM AILQFMSAGL PQVATPSTVH
CDHLIQAQIG GAKDLARAID LNKEVYDFLS TACAKYNLGF WKPGSGIIHQ IVLENYAFPG
ALLIGTDSHT PNAGGLGQLA IGVGGADAVD VMADLAWELK APKIIGVKLT GRMSGWTSPK
DIILKLAGIT TVKGGTGSIV EYFGSGVETF SCTGMGTICN MGAEIGATTS VFPFNNSMVD
YLNATGRSNI AEFANLYKKD YLSADEGCEY DQVIEIDLNT LEPHINGPFT PDLATPVSKM
KETAIKNGWP LEVKVGLIGS CTNSSYEDMT RAASIIEDAA THGLKSKAIY TVSPGSEQVR
ATIARDGQLK TFEDFGGVVM ANACGPCIGQ WDRQDIKKGD KNTIVSSFNR NFTARNDGNP
ATHAFVASPE MTTAFAISGD LGFNPITDTL KDANGNEFKL KEPVGVGLPV NGYDPGENTY
QAPPEDRSTV QVQIAPTSDR LQKLTPFKPW DGKDAERLPI LIKAVGKTTT DHISMAGPWL
KYRGHLENIS NNYMIGAINA ENGEANNVKN HYTGVYSGVP DTGAAYRDAG HKWVVIGDEN
FGEGSSREHA ALEPRFLGGF AIITKSFARI HETNLKKQGL LPLNFTDVAA YDKIQPEDEV
DLLGLTELAP GKNVILRVHP ADGSATWETE LSHTYNIEQI EWFKYGSALN KMAAVAAEKK