Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85181 |
Symbol | ACO1 |
ID | 4840474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 340000 |
End bp | 342521 |
Gene Length | 2522 bp |
Protein Length | 780 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640391789 |
Product | Aconitase, mitochondrial |
Protein accession | XP_001386080 |
Protein GI | 126139115 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01340] aconitate hydratase, mitochondrial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.154992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.331758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTCTTTTTTG TTGATTTTCT TCAGAAAAGA CTCTTGTTTC GTCAATTGTA GATTGCAAAC ATGTTATCTA GAACTGCTGT CAGAGCCCCA CGCTCTATCC GTGGGTTGGC CACTGCTGGC TTGACCAGAG ACTCCCAAGT GAACCAGAAC TTGTTGGAAT CTCACTCTTT CATCCAATAC AAGAAGCAAC TCGAGAACCT CGACATCGTC AAGGCCAGAT TGAACAGACC TTTGACTTAT GCCGAAAAGC TTCTCTACGG TCACTTGGAC GACCCTCACG GACAAGACAT CCAGAGAGGT GTCTCCTACT TGAAGTTGAG ACCAGATCGT GTCGCTTGTC AAGATGCCAC CGCTCAAATG GCCATTTTGC AATTCATGTC TGCCGGTTTG CCTCAAGTTG CCACTCCTTC CACTGTCCAC TGTGACCATT TGATCCAGGC CCAAATTGGT GGTGCTAAGG ATTTGGCCAG AGCTATTGAC TTGAACAAGG AAGTGTACGA CTTCTTGTCG ACTGCCTGTG CCAAATACAA CTTGGGTTTC TGGAAGCCCG GTTCCGGTAT CATCCATCAG ATCGTATTGG AAAACTACGC CTTCCCAGGT GCTTTGTTGA TCGGTACCGA TTCGCACACT CCTAATGCTG GTGGTTTGGG TCAATTGGCT ATTGGTGTAG GTGGTGCTGA TGCCGTCGAC GTCATGGCCG ACTTGGCCTG GGAATTGAAG GCTCCAAAGA TCATTGGTGT CAAGTTGACC GGTAGAATGT CCGGCTGGAC CTCGCCAAAG GATATCATCT TGAAGTTGGC TGGTATCACC ACTGTCAAGG GTGGTACCGG TTCCATTGTT GAATACTTCG GTTCTGGTGT TGAAACCTTC TCCTGTACCG GTATGGGTAC CATCTGTAAC ATGGGTGCCG AAATTGGTGC TACCACCTCT GTCTTCCCAT TCAACAACTC CATGGTTGAC TATTTGAATG CCACTGGTAG ATCCAACATT GCCGAGTTTG CCAACTTGTA CAAGAAGGAC TACTTGTCTG CCGACGAAGG CTGTGAATAC GACCAAGTCA TTGAAATCGA CTTGAACACC TTGGAACCAC ACATTAACGG TCCTTTCACC CCAGATTTGG CTACTCCAGT CTCCAAGATG AAGGAAACTG CCATCAAGAA CGGCTGGCCA TTGGAAGTCA AGGTTGGTTT GATTGGTTCT TGTACCAACT CTTCTTACGA AGATATGACC AGAGCTGCTT CTATTATTGA AGACGCTGCC ACCCATGGCT TGAAGTCCAA GGCTATCTAC ACTGTTTCTC CTGGTTCTGA ACAAGTCAGA GCCACCATTG CCAGAGACGG TCAATTGAAG ACCTTCGAAG ACTTTGGCGG TGTTGTCATG GCCAACGCCT GTGGTCCATG TATCGGTCAA TGGGACAGAC AAGACATTAA GAAGGGTGAC AAGAACACCA TTGTGTCTTC TTTCAACAGA AATTTCACTG CTAGAAACGA CGGTAATCCA GCCACTCACG CTTTCGTCGC TTCTCCAGAA ATGACCACTG CTTTCGCCAT CTCCGGTGAC TTGGGTTTCA ACCCAATTAC CGACACCTTG AAGGACGCTA ACGGAAACGA GTTCAAGTTG AAGGAACCAG TTGGTGTTGG TTTACCAGTT AACGGCTACG ACCCTGGTGA AAACACCTAC CAAGCTCCAC CTGAAGACAG ATCAACAGTC CAAGTGCAAA TTGCCCCAAC CTCCGACAGA TTACAAAAGT TGACTCCTTT CAAGCCATGG GACGGTAAGG ATGCCGAAAG ATTACCAATC TTAATCAAGG CCGTTGGTAA GACCACAACC GATCATATTT CTATGGCCGG TCCATGGTTG AAGTACCGTG GTCACTTGGA AAACATCTCC AACAACTACA TGATTGGTGC TATCAACGCT GAAAACGGTG AAGCCAACAA CGTCAAGAAC CACTACACTG GTGTATACTC TGGTGTTCCA GACACTGGTG CTGCTTACAG AGATGCTGGC CACAAGTGGG TTGTTATTGG TGACGAAAAC TTCGGTGAAG GTTCTTCCAG AGAACACGCT GCCTTGGAAC CAAGATTCTT GGGTGGTTTC GCTATCATCA CCAAGTCCTT CGCTCGTATT CACGAAACCA ACTTGAAGAA GCAAGGTTTG TTACCATTGA ACTTCACTGA CGTTGCTGCC TACGACAAAA TCCAACCAGA AGACGAAGTA GACTTGCTCG GTTTGACTGA ATTGGCCCCT GGCAAGAACG TTATTCTCAG AGTCCACCCA GCTGACGGTT CTGCCACCTG GGAAACCGAA TTGTCTCACA CTTACAACAT TGAACAAATT GAATGGTTCA AGTACGGTTC CGCTTTGAAC AAGATGGCTG CCGTTGCTGC TGAAAAGAAG TAAGTGATGT CTTGAGAGGA AATAGTTAAG TATCATTTCT TTTTGTTTAC CTATTAACAT TCATTCGTAT TTATTTATTC ATTATTATAA TATGTACTTT GTTTAAATGA CGAGCATTGA TC
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Protein sequence | MLSRTAVRAP RSIRGLATAG LTRDSQVNQN LLESHSFIQY KKQLENLDIV KARLNRPLTY AEKLLYGHLD DPHGQDIQRG VSYLKLRPDR VACQDATAQM AILQFMSAGL PQVATPSTVH CDHLIQAQIG GAKDLARAID LNKEVYDFLS TACAKYNLGF WKPGSGIIHQ IVLENYAFPG ALLIGTDSHT PNAGGLGQLA IGVGGADAVD VMADLAWELK APKIIGVKLT GRMSGWTSPK DIILKLAGIT TVKGGTGSIV EYFGSGVETF SCTGMGTICN MGAEIGATTS VFPFNNSMVD YLNATGRSNI AEFANLYKKD YLSADEGCEY DQVIEIDLNT LEPHINGPFT PDLATPVSKM KETAIKNGWP LEVKVGLIGS CTNSSYEDMT RAASIIEDAA THGLKSKAIY TVSPGSEQVR ATIARDGQLK TFEDFGGVVM ANACGPCIGQ WDRQDIKKGD KNTIVSSFNR NFTARNDGNP ATHAFVASPE MTTAFAISGD LGFNPITDTL KDANGNEFKL KEPVGVGLPV NGYDPGENTY QAPPEDRSTV QVQIAPTSDR LQKLTPFKPW DGKDAERLPI LIKAVGKTTT DHISMAGPWL KYRGHLENIS NNYMIGAINA ENGEANNVKN HYTGVYSGVP DTGAAYRDAG HKWVVIGDEN FGEGSSREHA ALEPRFLGGF AIITKSFARI HETNLKKQGL LPLNFTDVAA YDKIQPEDEV DLLGLTELAP GKNVILRVHP ADGSATWETE LSHTYNIEQI EWFKYGSALN KMAAVAAEKK
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