| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85080 |
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| Symbol | |
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| ID | 4840748 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 150533 |
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| End bp | 153189 |
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| Gene Length | 2657 bp |
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| Protein Length | 682 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640392063 |
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| Product | predicted protein |
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| Protein accession | XP_001386244 |
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| Protein GI | 150866594 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.133901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTATTTTCGC CGCCCTCAAG ATTCTTTAAC TTTTTGCCCA TTAGTAAGTA TCTCATCGCA
CCGTCAGCCT GGAGCTCCAC GTTCTGAAAG CTGAAGAAAC TCGAAAAATT GAAGAAACAA
CGACAAAAAT ACAAACACAA GAAGACAGTG TCAGAAACCC GTCTCTCTCA TCTTCACATC
CTCAACACGG TCACTAGTAG CTATTTCCAT CGCAGCCCTC GCTTTTTCTT TTGAATCCCT
AGCTTGCCCA TCTCAGAATC CATTCAAATT TCAATTCTAG GCATTCAATT TTCAATTCCA
TTCGCACAGT CTCCATACTT CAGCGTACCA TACATTCTGG AATACCAGCT AATTTTCCGT
ACTTTCTGCC ATTTGCCATT GCAATTTCTT TGTTTTTCAT TCTTCAGTTT CTTTGTATTC
TTTTTCCGTA CTAACACCAC AGCTATATGT CTAAAAGTAA GCTATCGTCC CGAAGTAACC
ATGCCGTTCC ATTAACTAGC GGAAACGCCA TTGCCAAATT AGTTTTCATC TTGTCCCAGT
TGGTCAAGGT GACCCATGCC CTTCCAGTGT TCAACAAACG GGTCCATGCT GCTGTTTCTC
ATCCCGACGT TGACGCTACA ACGTCCTCCA TGACAGCCGA GGAGTTTTAT GCCAATTTGT
TCACTTCTGT CTTTCTTGTT CTCGCTGGAG GTGTCTTTGC CGGCTTAACC TTAGGTTTGA
TGGGCCAGGA CGAAGTATAC TTGAAGGTCA TCGCCACCAG TGGTGAACCT CATGAACGTA
GACATGCTCG TAAAGTGCTT TCTCTTATTG GTAGAGGTAA GCACTGGGTT TTAGTCACAT
TGTTGTTGTC AAATGTCATC ACCAACGAAA CATTGCCTAT TGTATTAGAC CGTTGCTTGG
GAGGAGGATG GCCTGCTGTC GTCACTTCCA CCGCTTCCAT TGTCATTTTC GGGGAAATTA
TCCCCCAGTC CATCTGTGTC AGATATGGTT TGCAAGTCGG TGCTCTTTTC GCTCCATTTG
TCCTCGTCTT GATGTATATA ATGTACCCTA TTGCCTATCC AATTGCCTTG TTGTTGGACC
ACATCCTTGG TGAAGACCAC GGAACAGTTT ACAAGAAGTC CGGGTTGAAG ACCTTGGTGA
CTTTGCACAA GACGATGGGT GTAGAAAGAT TGAACCAAGA CGAAGTCACC ATCATCAGTG
CTGTTCTTGA CTTGAAGGAG AAATCGGTAA GTGCAATCAT GACTCCTATG GATAGAGTCT
ACACCATGAG TGCTGATACT TTGTTGGACG AGAAAACCGT AGAAGAAATC TTCAATGCCG
GTTTCTCCAG AATACCCATT CATTTGCCTA ACGAGCCATT GAATTTCATT GGTATGCTTT
TGGTGCGTGT CTTGATCAGT TACGACCCAG AAGATGCCTT GCCTGTAGCT TCGTTCCCAT
TGGCCACTTT GCCTGAAACG GCCCTAGACA CCTCTTGTTT GAACATCTTG AACTACTTCC
AAGAAGGTAA ATCTCATATG ATCGTGGTCA GTGAACATCC TGGTGAACCT GTAGGAGCCA
TTGGTGTGTT GACTTTGGAA GATGTGATTG AAGAGTTGAT TGGTGAAGAG ATTGTTGACG
AATCGGATGT ATACATTGAC ATCAACAAGA ATATCAAGCG TAAGAACCCG GGTCCTTTGT
CTAAGAGAAA CTTGACTTCT TACTTACATA ACTTATACCA AAGATCTGCT TCTACTTCCA
AGAGGAACTC CCTTGATGTT TCTGCTCAGC TGCCAGGTCA AGCGCTGACA CCACAGCCAC
TGCAAGTCCA GGTGCCAGAT TTGGCTACCA GGCTCAGTAC AACGAATGGA AATAATTTGG
TAGACACAAA GAACTGGAAA CCCAAGAATC CTGCTGCAAA CCCATTGGAA ACTAACAAGT
CTTTCGTAAC GATCAAAAGA CCAAACGCTG AGACCATTGC TGCCATTCCT TTGCCCAACA
GAGTCGGTGC ACCCGGTGCT TATGGCGCTG TTTTTTCTAC TGAAGTAGGG GCTATTGAAG
AAGCTGTTAG AAGAGCTTCT GTTGATGAAG AAGCTAGAGA AGATATTACT GCTGAGAGAG
CCGACGATAT CCGTGCACAT GAACACGAAG TAGTACCGAT GGCCATTCCT GTCACTGAAT
CGCAAGAATC GCGAATATAC AGAACAGGAG GGATCATTGA ATCTGTGATC AATGTCCAAG
GTGTGCACAA GACCATCATT GAAAATGTCA GCGATGAAGA CGAAGTTCTC GATATCAACG
ACATCGAAAA CGGCGAGATC GACCAGATAA GTGCGTCGTC ATCGTCGAAA AAGAAGAAGA
GCAAAAAGAA GAAGAAGCCT CGTAGCGATC TGTTCACCAT GAATCCTTAC AATGGTAAGG
ATGACACGAT CAACAGCAGT GTTATAGCTG TAGATGGCGA AGATGAAGAA GCGCAAGGTT
TGTTGAAGAA TGGTCATGAT AAAGGCTCGA GAAATTCGTC TGTTTCGGAA AGTAGTCACC
ACAGACGTTT GAGTATGTGG GACAAAATTC GAGGCAACAC GTCTTCCAAT GGAGGAGGTT
CATCTTGAGA ATGTAATAAA ACAATAGAAT TCCTATAAGA GATTTTAGTT TCTACAAACA
AAATAAATTG TGATAAG
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| Protein sequence | MSKSKLSSRS NHAVPLTSGN AIAKLVFILS QLVKVTHALP VFNKRVHAAV SHPDVDATTS
SMTAEEFYAN LFTSVFLVLA GGVFAGLTLG LMGQDEVYLK VIATSGEPHE RRHARKVLSL
IGRGKHWVLV TLLLSNVITN ETLPIVLDRC LGGGWPAVVT STASIVIFGE IIPQSICVRY
GLQVGALFAP FVLVLMYIMY PIAYPIALLL DHILGEDHGT VYKKSGLKTL VTLHKTMGVE
RLNQDEVTII SAVLDLKEKS VSAIMTPMDR VYTMSADTLL DEKTVEEIFN AGFSRIPIHL
PNEPLNFIGM LLVRVLISYD PEDALPVASF PLATLPETAL DTSCLNILNY FQEGKSHMIV
VSEHPGEPVG AIGVLTLEDV IEELIGEEIV DESDVYIDIN KNIKRKNPGP LSKRNLTSYL
HNLYQRSAST SKRNSLDVSA QSPGQASTPQ PSQVQVPDLA TRLSTTNGNN LVDTKNWKPK
NPAANPLETN KSFVTIKRPN AETIAAIPLP NRVGAPGAYG AVFSTEVGAI EEAVRRASVD
EEAREDITAE RADDIRAHEH EVVPMAIPVT ESQESRIYRT GGIIESVINV QGVHKTIIEN
VSDEDEVLDI NDIENGEIDQ ISASSSSVIA VDGEDEEAQG LLKNGHDKGS RNSSVSESSH
HRRLSMWDKI RGNTSSNGGG SS
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