| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_73878 |
|---|
| Symbol | |
|---|
| ID | 4840500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 972781 |
|---|
| End bp | 973802 |
|---|
| Gene Length | 1022 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640391815 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386375 |
|---|
| Protein GI | 126139705 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5272] Ubiquitin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AATCAATCAA TCGATTAAAC ATATTACATT CATAAATAAT GCAAATCTTC GTTAAGACTT
TAACTGGTAA GACCATTACG CTCGAAGTTG AATCTTCTGA CACTATTGAC AATGTCAAGT
CTAAAATTCA GGATAAGGAA GGTATTCCAC CTGACCAACA ACGTTTGATT TTCGCCGGTA
AGCAATTAGA AGACGGTAGA ACTCTTTCTG ACTACAACAT CCAAAAGGAA TCCACTTTGC
ACTTGGTTTT GAGATTGAGA GGTGGTATGC AAATTTTCGT CAAGACTTTG ACCGGTAAGA
CTATTACCCT CGAGGTTGAA TCTTCTGACA CCATCGACAA CGTTAAGTCC AAGATCCAAG
ACAAGGAAGG TATCCCACCT GACCAACAGC GTTTGATCTT TGCTGGTAAG CAATTAGAAG
ACGGTAGAAC TCTCTCCGAC TACAACATCC AAAAGGAATC CACTTTGCAC TTAGTTTTGA
GATTGAGAGG TGGTATGCAA ATTTTCGTTA AGACTTTGAC CGGTAAGACC ATCACTTTGG
AAGTCGAATC TTCCGACACC ATCGACAATG TCAAGTCTAA AATTCAGGAC AAGGAAGGTA
TTCCACCTGA CCAACAACGT TTGATTTTCG CCGGTAAGCA ATTAGAAGAC GGTAGAACTC
TTTCTGACTA CAACATCCAA AAGGAATCTA CCTTGCACTT AGTTTTGAGA TTGAGAGGTG
GTATGCAAAT TTTCGTCAAG ACTTTGACCG GTAAGACTAT TACCCTCGAG GTTGAATCTT
CTGACACCAT CGACAACGTT AAGTCCAAGA TCCAAGACAA GGAAGGTATC CCACCTGACC
AACAGCGTTT GATTTTTGCT GGTAAGCAAT TAGAAGACGG TAGAACTCTT TCTGACTACA
ACATCCAAAA GGAATCTACC TTGCACTTGG TGTTGAGATT GAGAGGTGGC CAATAGATGT
TTTTTTTATT TAGGAGACTA TAGATTCTTT GATATGTGAA ACGATAATAC TACGAGTCCC
TG
|
|---|
| Protein sequence | MQIFVKTLTG KTITLEVESS DTIDNVKSKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKSKIQDKE GIPPDQQRLI
FAGKQLEDGR TLSDYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKS
KIQDKEGIPP DQQRLIFAGK QLEDGRTLSD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT
ITLEVESSDT IDNVKSKIQD KEGIPPDQQR LIFAGKQLED GRTLSDYNIQ KESTLHLVLR
LRGGQ
|
|---|
| |