Gene PICST_73842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_73842 
SymbolRSP27 
ID4840565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp1048626 
End bp1049149 
Gene Length524 bp 
Protein Length151 aa 
Translation table12 
GC content43% 
IMG OID640391880 
ProductUbiquitin/40S ribosomal protein S27a fusion 
Protein accessionXP_001386390 
Protein GI126139735 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1998] Ribosomal protein S27AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAGAAGCAAC TTTTGCAGAC AAGCCAAAAT GCAAATTTTC GTCAAGACCT TAACTGGTAA 
GACTATCACT TTGGAAGTCG AGTCCTCGGA CACCATCGAC AATGTCAAGT CCAAGATCCA
AGACAAGGAA GGTATTCCAC CTGACCAACA ACGTTTGATC TTTGCTGGTA AGCAATTGGA
AGACGGCAGA ACTCTTTCTG ACTACAACAT CCAAAAGGAA TCCACCTTGC ACTTGGTCTT
AAGATTGAGA GGTGGTGGTA AGAAGAGAAA GAAGAAGGTC TACACCACCC CAAAGAAGAT
CAAGCACAAG CACAGAAAGC ACAAGTTGGC TGTCTTGACC TACTACAAGG TTGACAACGA
AGGTAAGGTC GAAAGATTGA AGAGAGAATG TCCTGCCCCA ACCTGTGGTT CCGGTGTCTT
CATGGCCAAC ATGAAGGACA GACAATACTG TGGTAAGTGT CACCTCACCT TCAAGGCCAA
CTAAGTTTAC GGTAGTTATT TGATAATGAA TGTTAATTTA GTAT
 
Protein sequence
MQIFVKTLTG KTITLEVESS DTIDNVKSKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 
IQKESTLHLV LRLRGGGKKR KKKVYTTPKK IKHKHRKHKL AVLTYYKVDN EGKVERLKRE
CPAPTCGSGV FMANMKDRQY CGKCHLTFKA N