Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_73842 |
Symbol | RSP27 |
ID | 4840565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 1048626 |
End bp | 1049149 |
Gene Length | 524 bp |
Protein Length | 151 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391880 |
Product | Ubiquitin/40S ribosomal protein S27a fusion |
Protein accession | XP_001386390 |
Protein GI | 126139735 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1998] Ribosomal protein S27AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AAGAAGCAAC TTTTGCAGAC AAGCCAAAAT GCAAATTTTC GTCAAGACCT TAACTGGTAA GACTATCACT TTGGAAGTCG AGTCCTCGGA CACCATCGAC AATGTCAAGT CCAAGATCCA AGACAAGGAA GGTATTCCAC CTGACCAACA ACGTTTGATC TTTGCTGGTA AGCAATTGGA AGACGGCAGA ACTCTTTCTG ACTACAACAT CCAAAAGGAA TCCACCTTGC ACTTGGTCTT AAGATTGAGA GGTGGTGGTA AGAAGAGAAA GAAGAAGGTC TACACCACCC CAAAGAAGAT CAAGCACAAG CACAGAAAGC ACAAGTTGGC TGTCTTGACC TACTACAAGG TTGACAACGA AGGTAAGGTC GAAAGATTGA AGAGAGAATG TCCTGCCCCA ACCTGTGGTT CCGGTGTCTT CATGGCCAAC ATGAAGGACA GACAATACTG TGGTAAGTGT CACCTCACCT TCAAGGCCAA CTAAGTTTAC GGTAGTTATT TGATAATGAA TGTTAATTTA GTAT
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Protein sequence | MQIFVKTLTG KTITLEVESS DTIDNVKSKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGGKKR KKKVYTTPKK IKHKHRKHKL AVLTYYKVDN EGKVERLKRE CPAPTCGSGV FMANMKDRQY CGKCHLTFKA N
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