| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_73580 |
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| Symbol | |
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| ID | 4840439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 582618 |
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| End bp | 585229 |
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| Gene Length | 2612 bp |
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| Protein Length | 782 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391754 |
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| Product | predicted protein |
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| Protein accession | XP_001386306 |
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| Protein GI | 150866640 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00727] small oligopeptide transporter, OPT family
[TIGR00728] oligopeptide transporters, OPT superfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0228681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGC TCAGATCTGC TTTTAAGTCC TCCGGGGCCA CTACTACCGA AGTTTACAGC
GACGAAAAGA AGAATGATTT CGAAACTGGC TCTCCAGTGA ACTTGGAACT TGTAGCTTCA
AAGTCTCAGG AATTCGACCC TATTTCCTCT AACCTTGTTA AGGATGTCAT CGAAGATGAG
TATGCTACTA TTACTGTCGA AGATGACTCT CCCTACCCAG AAGTCAGAGC TGCAGTTCCA
TCTACCGATG ACCCAAGTTT ACCTCAAAAC ACCATCAGAG CCTGGGTCCT TGGTCTTATC
ATGACTACTA TTGGATGTGG TATTAACCTT TTGTTCTCTT TGCACACACC ATCTGCTTAC
ATCACTACGT ATGTTACCGC CATTGTTGCT TGGCCTCTTG GTCTCGCCTG GGCTAAGTTT
CTTCCTAACT GGAAGATTTT CGGTTGTGAA CTTAACCCTG GTCCTTTCAA CATTAAGGAA
CACACAATTA TCACCATTAT GGGAAACGTC TCTTTCGGTG GTGGTGCTGC TTATGCTACC
GACATTTTGT TGGCTCAAAA CAAATTCTAC AACCAAGATT TCGGCTGGGG TTTCGACTTA
CTTGCTATCT GGTCGACACA ATGTATAGGA TTTGCATTAG GTGGGATCGC TAGAAGGGTT
GTTGTCTATC CTTCATCCGC TATTTGGCCA TCCAACTTGG TTACCTGTAC TTTCTTGACC
AACTTGCACA TCAATGAAAA TCATACAGTT AACGGATGGA AGATTTCTCG TCTTGCTTTC
TTTGGCGTCA TCCTTGGTGG CTCTTTCGTG TACTACTGGT TCCCTGGTTG GATCTTCCAA
GCTTTGTCTT ACTTCTCGTG GATCACTTGG ATTAAGCCAA ACAACGTCAT CATCAACCAA
ATTTTCGGTT CTTACACTGG TTTAGGTATG TTCCCTAACA ATATCGCCTT GGACTGGAAC
CAGATCGCTG GTTATGTTGG CTCTCCTTTA ATTCCACCAG CAGGTACCAT TGCTACTATT
TTCTTGTCCA TGGTGGTTAT CTTTTGGATC ATTGTGCCAG CTGTCCACTA CTCTAACACT
TGGTACGCTC AGTACTTGCC AATTTCCTCG TCTTCATCTT ACGACAGATA CGCTAAACGT
TACAATGTGT CCAGGATTAT TAACCCAGAG ACTTTGACTT TCAACAAGGA AGCCTATGAA
GCCTACTCGC CACTTTTCTT GTCTACCACG TTTGCTATGT CTTATGGATT GTCATTTGCT
TCCATCACCG CCACCCTTGT TCACACTGTC CTTTTCCACG GTAAGGATAT CATTAACCAA
GTTAAACAAA AGGAAAAGAT GGATGTTCAC TACAGATTGA TGAAGCTGTA CAGGGAAGCA
CCAGATTGGT GGTTCGCTGT TGTTTTTGTT GTTTTCTTTG CTTTGTCTAT TGTGACCGTC
AGAGTGTGGA ACACCGAATT CCCAATCTGG GCGCTTGTTG TTGCTTTGTT GATTGCCATT
GTCTTCTTGC TTCCAGTTGC TATCATCTAC TCTCTCACTA ACATTGCTGT TGGATTGAAC
GTTGTGACTG AATTCATCAT CGGTTACATG CTTCCAGGTA AGCCATTGGC CATGATGTTC
TTCAAGACTT TTGGTTACAT CACCAACAAC CAAGCTGTCA CTTTCGCTCA AGACATGAAG
TTGGGACACT ACATGAAGAT TGCTCCAAGA GTGTTGTTTG CTTCTCAATT GATTGCTACT
ATTTGGGGAT CCTTGGTGCA AATTGCTGTT TTGAGATGGT CTTACGGTAA CATTGACCAT
CTTTGTGACC CAGAACAAGT TAATAACTAC AACTGTCCAA ATGGTACAGT TTTCTTCAAT
GCTTCTATCA TCTGGGGTGT CATTGGACCA CAGCGTCAAT TCTCTTCAGG TCAAATCTAC
TACGGTTTGT TGTTCTTCTT CATTATTGGT GCTATCTTGC CAATCATTAA CTGGTTGGTG
TTGAAGAAGT GGCCAAACTC GATGATCAGA CACTTGAACT GGCCAGTGTT CTTCTCTGGT
ACTGGATACA TTCCACCAGC CACCGCTTAC AACTACACAT CGTACTGTTG CGTTGGTTTA
GTTTTCGGAT GGTGGATCAA GAAGAGATGG TTCCACTGGT GGTCCAAGTA CAACTATACC
TTATCCGCTG GGTTGGATAT TGGATTAGCC TGGGGTATGT TGATCATTTT CTTGACCTTG
TACTTGACTA ACGCCACGGC ACCAAACTGG TGGGGTAACA ACGTTATCCT TGGTACATTG
GAACAGAACA ATGCTGCCAT CAGAGTTGTT CTTCCAGAAG GTCAAGGTTT CGGTCCATCC
AGCTGGTAAT TAACTTAGGC AAGTGACGAG CCTCCTAATT TAGTTTGTAT ATATGAACAA
ATCTTTTAAT TATTAATCGC AAGTATCAAT CGCGTCTGAA GCACTTCGCC ATAGATTGCA
ACGGAGAAGT GACTCTTCGC AGCCTAGAGT GGTTGCGGAA GGTGATAAAT GCCTGTGTGA
TTTTAGTTCG GTCGTGTCAG CAACTGACCT ATTATTTGTG GTTGTTGTTA CTCAATCGGT
TTATTTTGTG GATGGAGATC AATACATCAT GC
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| Protein sequence | MEKLRSAFKS SGATTTEVYS DEKKNDFETG SPVNLELVAS KSQEFDPISS NLVKDVIEDE
YATITVEDDS PYPEVRAAVP STDDPSLPQN TIRAWVLGLI MTTIGCGINL LFSLHTPSAY
ITTYVTAIVA WPLGLAWAKF LPNWKIFGCE LNPGPFNIKE HTIITIMGNV SFGGGAAYAT
DILLAQNKFY NQDFGWGFDL LAIWSTQCIG FALGGIARRV VVYPSSAIWP SNLVTCTFLT
NLHINENHTV NGWKISRLAF FGVILGGSFV YYWFPGWIFQ ALSYFSWITW IKPNNVIINQ
IFGSYTGLGM FPNNIALDWN QIAGYVGSPL IPPAGTIATI FLSMVVIFWI IVPAVHYSNT
WYAQYLPISS SSSYDRYAKR YNVSRIINPE TLTFNKEAYE AYSPLFLSTT FAMSYGLSFA
SITATLVHTV LFHGKDIINQ VKQKEKMDVH YRLMKSYREA PDWWFAVVFV VFFALSIVTV
RVWNTEFPIW ALVVALLIAI VFLLPVAIIY SLTNIAVGLN VVTEFIIGYM LPGKPLAMMF
FKTFGYITNN QAVTFAQDMK LGHYMKIAPR VLFASQLIAT IWGSLVQIAV LRWSYGNIDH
LCDPEQVNNY NCPNGTVFFN ASIIWGVIGP QRQFSSGQIY YGLLFFFIIG AILPIINWLV
LKKWPNSMIR HLNWPVFFSG TGYIPPATAY NYTSYCCVGL VFGWWIKKRW FHWWSKYNYT
LSAGLDIGLA WGMLIIFLTL YLTNATAPNW WGNNVILGTL EQNNAAIRVV LPEGQGFGPS
SW
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