Gene PICST_68327 details

Gene Information

• Locus tag: PICST_68327
• ID: 4840445
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009047
• Strand: +
• Start bp: 601822
• End bp: 608526
• Gene Length: 6705 bp
• Protein Length: 2212 aa
• Translation table: 12
• GC content: 45%
• IMG OID: 640391760
• Product: hypothetical protein
• Protein accession: XP_001386126
• Protein GI: 150866499

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATCC GTAAGAGCAC GACATCTCCG GTTTCTGGAA CCGATCGGGC CGATCTCAAC 
GACAGCTTCG CCGTTTCGGA AGCAGAACCT TCACAACTTC ATGGCCATGT AGAGTACGGA 
GCAGACGTGT CAGTAGGAGT TGAAGATGCG TCTGGTTTCA CAGCTGAAGA CGCGTTTCAA 
GTCGGGGGCG AAGAAGACGA AGAGCAGGTA TCCACTGTGA CCAATGGCGC AGTCGTACCA 
CAATCCGTAG TGGCAGCAGA ATCCGCAGAC GAAGACGTGT TGCTGAGATC CACCAAAAAG 
GAAGAGTTTC TTCCGGAATC GACTTCAATT GCAGAACCTG TTAAGCTGGA TGTTATTACA 
AATGTCATCG ACGCCAACGC CGATACTGGC CTTGATGATG ATCCATGGAT GAAAGATGGC 
ACGCCAGAGT TCCCCCCCGC AGACGAAAAC CTCCCAGAAG TGCCTCCAGT AGCAGAAACA 
AAAGTAGAGA CGTCAAAAAG TATCGCCAAG CAGCAAATAT ATGGAGAAAA GGTGGAAGAT 
TTCACTGAAA ATTCGGCTTC TCCACAGGAA GTCGATTCGA AGCAAACATC AAGCACCATA 
GCAGACTTTA TTCCAACGCC AGAGCATATT CATTCAAATC TTCATACTAG TGAAACAGAA 
AATGAACCTA TTAAACAGTC TCAATTGCCT TGGGAAAGCC ATGTAGAACA GATAGAAGCA 
TTACCATGGG AAGAACAGCC ACAAAAGGTT GAACATGTAC TACCATGGGA AGAAAAACCC 
GATGAAGTAT CACAGAAAGA TGAAGCTTTG CCATGGGAAG AGCGAAGAGT AGAACACCCA 
GAACAAGCCG CAGAGTCTAC ATTGCCATGG GAAGAACAAC CTAATGTAGA AGAATTTCAA 
GCTCACGAAC CTGCATTACC ATGGGAAGAA CGACCCGAGG TAGAAGAGTC TTCATTACCT 
TGGGAGGAAA AAGTTGGAGA ATCTCAAGGC CAGGAAGCTG CATTACCTTG GGAGGAACAA 
CAAGAAGTCG AAGTATCATC ATTACTCTTA GAGGAAAAAG TTAGAGAATC TTCGTTGCCT 
TGGGAGGGGG AAGAAGGAGA ATCTCAAGCT CAAGAATCTA AGTTACCTTG GGAAGAGCAA 
AGAATACAAT CTACACCACC TTCGGAAGAA CAAGTATTAG AACCTGTAGA GGGTTCTTCA 
TTGCCTGTGG AAGAAAAAGA TCTGACAGAA GGATCATTGC CGTGGAACCA ACATCACGAA 
GGGGAAGCAC AAGAGATTTT ACCATGGGAA CAAAGCACGA AACCACAAGA TACGCAACCA 
CAAGTATCAC AGGAAGAACT ACATGATTAC TCTGTTTCGA ATGTAATTTC ACAAAGTGAG 
ATTGTGGAAG AACAAGCCCA GCCTGTATCA CAGGCTTACG AAAGTCAGTT TTTGGCTGGT 
TTCTTTACTG AACGTCGCCC GGAACAAGAA TCTGAAACCA AACAAGAGTC GTTAGATGAG 
TTGTTTGAGA AGGACGAAGA CTTTCTTCCA GAATTAAAGC AACCTGTTGA ACAAAGCACT 
CAAACTTCGA AACCAAAGGA GTTCAACTTA CCGGAATTGG ATCTTGACGA CGATTTACTT 
TTGGATGATG ACTTGTTAGA CGATGACGAA CCTGAACTTG TTCCAGAACC TGTAGCGCCA 
GTGGAGCCAA TTCAAGAAGC TATCCAGAAT AATGTTGCCA AGTCTCCACG TCAGACTTAC 
ATTCCAACTC AGCCTCATCA TAACATGTAT GCTCCTCAAA TCAGCAGAAC AGATACTGGA 
GAGTATGTAA AAAAACTTGA AGAAAACAAG AAGAGGAACG ATGCTTACGA CTTTCCAGAC 
ATTTTGATGC CACCGAAAGT TAAACCTGCT CCGAGACATC ATCAGCCTAC TACCAAATAC 
TCGCAACCAG TAGCATCACC AAATCTTTCC AACATCCCGT CTGCTCCACC TGCAACTACT 
ATTCCTCCAC CTGTGAGTAT TGGAATTGAA GCATCTAAGA AGGAGCTTCC TACAACTCCT 
CAAGTCGCAC CAGGAAAGCC CAAGTCTTTC TTTGAGGAAC TTCCTGTTTC AATGCCCAAG 
AAAGCTGCAA GAGCAGCACC CGTAAAGGCT GTCAACCAGC CACATATCCA GAAGTCTCCA 
CAGATTAGTA ATACGCCAAT CAGTGCGAGC TCAAAACCAG CACCAGTAAA TCCGTATATG 
CCTAGTAATA CTCAAAAACA GAATCCTCAT TCTCCTCTTC AAGGCTCTCA ATACTCGTTT 
CCAAGGAAGA CCAGTTCTGG GTTGGCACCG CCACCAGCTT TGAATCAATA TGCTCCTCCT 
TCTCTGAATC AATATGCAAC AGTATCTGCA CAAGTTCAAC CAGGACTTCC TCAGTCAAGC 
TTGCCGCAAT CAGGAATGTC TCAGCCTGGA TTGCAACCCT TCCCACAACC TCAGGGTCAT 
TTGGTTCCTC CCAACTTAGT GGCTCCTCAG ATTCAGAATT CTCCACTAGG ACAACCTCAG 
CAGACACACA ACTATGCTCC TCCAATCAAC ACCAACGTTG CTAGAGCTCA AGGAAATCTT 
TCAGCTACGA GTCCATATGT TCCCAACGCT GGTCCTTATG CCCCTAATAA TCACAATAGG 
TCTCATTCCC GAGCTAGTTC GTTGGTAGGT GGTGGAAAAG GTAAGGAGAT CAATCCGTAT 
GCTCCTGCTT TACCTCCTGT AAGTCATCTG GGTACTTCTC CTTCAATCGC TCAGTCTTCA 
TTAACTTCGA GAAACAGAGG TATATCCAAC CCTAGAAATA TCTACAGCAA GGCCCAGCCA 
GCTCCAAAGA TTTCTAATCC CAACTCGTTG AACCAGAGAC AGTTCCCTAT CTTCAACTGG 
AGCAACTCGC AGAAAGTTGT CACTTTAATT CCAAACAGTA GCCATAACTT GTACGAGCTG 
CACGGAGAAT CTATCAGAGT AAGAGCTGCG ATAGATTTGC TCAAGGATAA GGAGATGTAT 
TCTACGTTTC CAGGTCCATT GCTGAAGAGT AAAACCAAGA GAAAGGATGT AGAGAAATGG 
TTAGAATCCA ACATTGCTTT GCTCACCACT AACAGTATTG AAAACCAGGA TGAGTACTTG 
CTCAACCAGG TATTGTTGGA GGCAGTGAAG TTTGAAGGTG GTTTCAATTC TCATGAATTC 
ATCAAAGCAG TATGTATGGT ATTGAATCCT ACAGCAGACT ACAATACTCC TGGTGATATT 
TCGGGGATGA CAAGTGTCAG TGCCAATGCC TACAAATTGG ACAATGCTGG AATTGGTATT 
GTATTCGGAT TGATTCAGGG AGGTCATATT GACAAAGCGC TTGAATTCAC GTTGTCTAAA 
GGTGACTGGG CTTTAGCTCT TGTTGTATCG AACTTTGCTG GCCACGATCG TTTTGCTAAG 
GTAGCAGCGG ACTATGCAAG ATTCAGTTTT CCCTATCAGA AGTCCAACAA CAAAATCCAC 
CACATCATTC CTATTCTTCT CAAGTTGGCT GTAGGAAATG TGAAGAGTGT CATTGACGAT 
TTAAACGCAG TAGCTACAGA AGGTGAATAT GCCAGTCATC ACTGGCGAGA AATCGTATCC 
TCTGTAATTA TCAGCGGAGT CAGTAAGTCA CAGGACTTCT TGGTTGAATT CGGTAAATTT 
TTGGGTCTTC ACCACAACAT TGCAGCTTCG GAAATCTGCT ATGTAATTGC AGGTTTGCCA 
TTATCCCCTC AGGCCTTACA ACCTAGTGGT ATAGTAGTTT CTGTAATTGG ATCCCTCACT 
GGCACTTCAA TGTACACGGA AGTGTACGAG TACATTTTGA AGATCAGTAC TGTATTTGTT 
CAACAGGGAG TTGGCATTAT TCCGCACTTG TTGCCATTGA AGCTCAAACA TGCTACTGTT 
TTGGCTGATT ATGGGTTGTT TAACGAATCG CAGAAGTACA TTGATAGCAT CAACAACAAC 
ATGAAGACAT TGGGTAATCG TTCTCCTTAC TTGAATGCTG CGTTCATTCA TGAGTTACAG 
AGTTTGATTG TCAGACTTCA AGAACTAGGC TCCAGTGAAC TGAGTTGGTT TAGCGGAAAG 
ATGAGTAAAG TAAATCTTGA CAATATCTGG GGACAAATTG ATAAGTTTAT TGGCGGCGAA 
GAACCCAAGT CCAAGTCCGG CGAGAATGGC GTATTCAGTA AGTTCAGTCC TTCTGTTTCA 
AGAAACACTT CTACCTTGGA TTTTACCGCT ATGAATGTTT CTTCAAACAA GTATCCTCAT 
TCTCTGCCAC AGATGCCTTC GGGACAGTTT GGATCTTCCT CAATTGCTCC ATCTACTGCT 
GATGGTGTTC TGGTACCAGT TACTAGAGCC ATGCCTCCAT TGCAATCGTT CAATTCTACT 
CCTGCTATCA ACACCTTAAG CATGAATAGC AAGTACTCAC TTCCTCACTT ACAACAGACT 
AAGAATGCCA GTTTCTCTGT TCACTCACAG TCTACGCAAG TACCTCCATC TCATCATCTG 
ACCCCACAGC AGTCACATGT ACATCCTAAT GTTCCGCTTC ATCATGCGGC CGAGTCGAAG 
TATTCTCCAT CGAATGCTTC TCCACAGGTC CCTGACTCTA CTGCCTCTCC GTATGTTCCA 
CCAGTAAAGA GAACCACACC TAGAGTTGCT GCTAAAGCAG TGAATGCTAC TGGACCATAT 
GTGTATGCTA ATCCAGAGGG CCACGTCTCT AATTCTTCGA TTGGATCTCA TAGGCAGCAC 
GGTTATCATC CTCCTACCAG CCAGACTCCT ACTGTGAATG CTAAGAGACA TTCTGTAGCC 
AGCGTTATTT CCAACGAGGC CACACCTAAT AGCGAAGTGA TTCATTCGCA CCACAACCAC 
TCTCCACTGA TTCAAAGTGA TATCAGTATG GATTATCCAC TGGAATTCAA ACCTCCCCCC 
GCAGTCAAGC AAATTGTAGA CCATAAGCTT GTATCGGCTC TTAATGATCA TGCCCCAGAC 
ACCATTGACG AGTCTCCGGA ATTTAAGAGT GAAGCTATTG TAGAGAAAGT TCCACCTTTG 
AGTGCTTCCC AGGAAGTCTC AGGACAGCCA TCTGCTGCTT CCACTTCTGT GCCTTCTTCC 
GAGAAGGCTG CAACTGTGGA TGACGAAACT ACATCAAGTG CTGCATCTGC TCCACCTCCT 
CAAAGTAAGG CTTCATTAAA GAAACCAGCA AAGGTCAATC CATATGCTCC AGGTGCCAAC 
AGGTCTGGCA CTGCTAGAAA GAGCAAATAT GGACCTCCCA CGGGAGCTTC CTCTAGCAAG 
TATTCAGTAC CTGCTAACTT GGCTCAGCAG GATGAGCCAA TCAATGATGA CACCTTGAAG 
TACGGAAGCA TGTTTGATTA TAGTGGGTAT AAGACAGGAG AGCCAACGGT AGCTGACAAC 
GACAATGTAG AACCGCCTAC GCAATCTGAG ACTACTTCGA AGCATGCGGC TGAAGAAGAT 
GTTACTGAGT TGATAGTTGA GCCCAAGCCT TCTATCCCAG AGAGTCCTAG CGCTCCTAAG 
ATCGTCAGAG AACCAGAAAC TTCAGCACCA CCTCATTTCA AACAGCCCGA ATCGCACTTT 
GCGCCATTTG GCTATAACAC TCCATTGAAG GCTAGAACCA AACATTATGC AAATATCGAT 
GATAGTTTTG ACAACTCTGA GGTGTCTGGC GACCAAGATC TTACCGATAT CCATACTCCC 
AGAAAGAGAC CATTGATTCT CAACAACGGT CCTCCGCAAT TGACAGGCAA AGAATCAATG 
TTCAATCCTT ACCAAGGCGA TAGTGGAGTT AATAAGTTTG GACTTGACTT CCCCATTCCC 
GGCTCTCCAG ATTACACCAC TAGAGCCAAC AGTGTAGTAG ATCAGCCCGG CTACTTCTCT 
TCGAGACTAT CGCAATCACA GCAGTCAGCC TTGTACCAAC AATACGAAGT AGAGGACGAC 
ACTGTGAGAG ACTACGTACC AACTGTAGAA GAAGACGACG AAGAAGATGA AGATGAAGAA 
GATAGGGATA AGAAGAGATT ACAGGAAGAA GAAGAGAAAA GGGCCAAGGC AGCTTCTGAA 
GAAGCAAAAA AGAAAGCTTC TGAAGCTGCC GCTAAGAGAG ATCCCGGTAG AGGGTGGTTC 
AATTGGCTGG GTAAGAATGA TGGCAAGCCT AAGCCTATCA AGGCCAAGCT TGGAAACCCC 
AGCACTTTCT ACTACGACGA AAAACATAAA AGATGGCTCG ACAAGTCTAG GCCCATTGAA 
GAACAACTAC AGGCAGCAGC TCCTCCTCCA CCTCCTGCCA TGAAGAAAAA GGCACCTGCA 
GCTTCTAGTA ATATAACAGC TTCTTCTGGT CCACCTTCAG CTGGCCCACC TCCAGGAATT 
AATCCATCTG GGGTTGCTCC AACTGCTGCA CCTTCTGGTC CTCCACTGGC ACCACTGGGA 
GTTACCAGTG GACCTCCTTC CATCGGAACC GGCCCATCTA ACGGAGCCGG AGGTCCACCT 
TTTGCCAAAG CTACATCTGT ACAAAGCAGT GCCCCTAGCC TTGCTAATGC TGGTTTGGAT 
GATTTGCTTT CTATGGGTGG CAGTTCTGTT GCAGGAGGAA CTCGTAAAGC AAAGAGAAAC 
ACCCGGCGTG GACATATCAA TGTGTTTGAT AAAAAGTAGA AATGTACATA AAATAGCATT 
ACATCACAAT ATATATGGTA GACTTATAAG AGTAGAACAA TAATT 

 

Protein sequence

MSIRKSTTSP VSGTDRADLN DSFAVSEAEP SQLHGHVEYG ADVSVGVEDA SGFTAEDAFQ 
VGGEEDEEQV STVTNGAVVP QSVVAAESAD EDVLSRSTKK EEFLPESTSI AEPVKSDVIT 
NVIDANADTG LDDDPWMKDG TPEFPPADEN LPEVPPVAET KVETSKSIAK QQIYGEKVED 
FTENSASPQE VDSKQTSSTI ADFIPTPEHI HSNLHTSETE NEPIKQSQLP WESHVEQIEA 
LPWEEQPQKV EHVLPWEEKP DEVSQKDEAL PWEERRVEHP EQAAESTLPW EEQPNVEEFQ 
AHEPALPWEE RPEVEESSLP WEEKVGESQG QEAALPWEEQ QEVEVSSLLL EEKVRESSLP 
WEGEEGESQA QESKLPWEEQ RIQSTPPSEE QVLEPVEGSS LPVEEKDSTE GSLPWNQHHE 
GEAQEILPWE QSTKPQDTQP QVSQEELHDY SVSNVISQSE IVEEQAQPVS QAYESQFLAG 
FFTERRPEQE SETKQESLDE LFEKDEDFLP ELKQPVEQST QTSKPKEFNL PELDLDDDLL 
LDDDLLDDDE PELVPEPVAP VEPIQEAIQN NVAKSPRQTY IPTQPHHNMY APQISRTDTG 
EYVKKLEENK KRNDAYDFPD ILMPPKVKPA PRHHQPTTKY SQPVASPNLS NIPSAPPATT 
IPPPVSIGIE ASKKELPTTP QVAPGKPKSF FEELPVSMPK KAARAAPVKA VNQPHIQKSP 
QISNTPISAS SKPAPVNPYM PSNTQKQNPH SPLQGSQYSF PRKTSSGLAP PPALNQYAPP 
SSNQYATVSA QVQPGLPQSS LPQSGMSQPG LQPFPQPQGH LVPPNLVAPQ IQNSPLGQPQ 
QTHNYAPPIN TNVARAQGNL SATSPYVPNA GPYAPNNHNR SHSRASSLVG GGKGKEINPY 
APALPPVSHS GTSPSIAQSS LTSRNRGISN PRNIYSKAQP APKISNPNSL NQRQFPIFNW 
SNSQKVVTLI PNSSHNLYES HGESIRVRAA IDLLKDKEMY STFPGPLSKS KTKRKDVEKW 
LESNIALLTT NSIENQDEYL LNQVLLEAVK FEGGFNSHEF IKAVCMVLNP TADYNTPGDI 
SGMTSVSANA YKLDNAGIGI VFGLIQGGHI DKALEFTLSK GDWALALVVS NFAGHDRFAK 
VAADYARFSF PYQKSNNKIH HIIPILLKLA VGNVKSVIDD LNAVATEGEY ASHHWREIVS 
SVIISGVSKS QDFLVEFGKF LGLHHNIAAS EICYVIAGLP LSPQALQPSG IVVSVIGSLT 
GTSMYTEVYE YILKISTVFV QQGVGIIPHL LPLKLKHATV LADYGLFNES QKYIDSINNN 
MKTLGNRSPY LNAAFIHELQ SLIVRLQELG SSESSWFSGK MSKVNLDNIW GQIDKFIGGE 
EPKSKSGENG VFSKFSPSVS RNTSTLDFTA MNVSSNKYPH SSPQMPSGQF GSSSIAPSTA 
DGVSVPVTRA MPPLQSFNST PAINTLSMNS KYSLPHLQQT KNASFSVHSQ STQVPPSHHS 
TPQQSHVHPN VPLHHAAESK YSPSNASPQV PDSTASPYVP PVKRTTPRVA AKAVNATGPY 
VYANPEGHVS NSSIGSHRQH GYHPPTSQTP TVNAKRHSVA SVISNEATPN SEVIHSHHNH 
SPSIQSDISM DYPSEFKPPP AVKQIVDHKL VSALNDHAPD TIDESPEFKS EAIVEKVPPL 
SASQEVSGQP SAASTSVPSS EKAATVDDET TSSAASAPPP QSKASLKKPA KVNPYAPGAN 
RSGTARKSKY GPPTGASSSK YSVPANLAQQ DEPINDDTLK YGSMFDYSGY KTGEPTVADN 
DNVEPPTQSE TTSKHAAEED VTELIVEPKP SIPESPSAPK IVREPETSAP PHFKQPESHF 
APFGYNTPLK ARTKHYANID DSFDNSEVSG DQDLTDIHTP RKRPLILNNG PPQLTGKESM 
FNPYQGDSGV NKFGLDFPIP GSPDYTTRAN SVVDQPGYFS SRLSQSQQSA LYQQYEVEDD 
TVRDYVPTVE EDDEEDEDEE DRDKKRLQEE EEKRAKAASE EAKKKASEAA AKRDPGRGWF 
NWSGKNDGKP KPIKAKLGNP STFYYDEKHK RWLDKSRPIE EQLQAAAPPP PPAMKKKAPA 
ASSNITASSG PPSAGPPPGI NPSGVAPTAA PSGPPSAPSG VTSGPPSIGT GPSNGAGGPP 
FAKATSVQSS APSLANAGLD DLLSMGGSSV AGGTRKAKRN TRRGHINVFD KK