Gene PICST_68255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_68255 
Symbol 
ID4840423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp136828 
End bp138080 
Gene Length1253 bp 
Protein Length289 aa 
Translation table12 
GC content47% 
IMG OID640391738 
Productpredicted protein 
Protein accessionXP_001386044 
Protein GI150866439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.260132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AATTTCACGT TTGTAGAATT CAGTCCTAGA CCAATTCCTA AACGAAATTC AACTCTTCAA 
CTATAGTTAT GTCTGAAGGT TACGATAGAC AAGCCCCAGC CGTTCCTGAA GGTGAAGGTT
CGATTCCCGT GAACCAGTCG GGTTCTGAAT CGAGCAACCA GCAGCTTGAA AGGCCCCGTC
TTCCCCAATT GCCAGAAGGC TGGATCGCAC AATGGGACGA TGAGTACAAC CACTATTTCT
TTGTTAATAC TGTTACCGGC GAATCGCAGT GGGAAATTCC TGAGTCTAGT GTGCCAGGTG
CATCAGAAGC TCGTTCTAGC GAGTTTGCAC CTTCTGACTC AAACATCGCC GACAACGAAT
CTGCCGAAAG AGGTATTGGT GGAGACGGTA CTGGCGAAAG GGGCCTTGGT AGTGTAGTGG
GCTCTCTTTT ACTGGGAGGT AACTCTGGCC ATCAATCCGG AGGCACTTCA GGTCTTATTA
GCTTAGTCAG TTCTTTGGCT TCATCCAAGA CTAGTGGAGG TTACGGTGGA GGCTACGGTG
GAGGATATGG TGGAGGATAC AACCGTCCAT CACACGCTCC AGGTAGTGGT GGAGGTGCTG
GTTCACTCTT AGGCCTTTTG GCTGGAGGCT CTAGTGGAGG TTACGGTGGT GGCTATGGTG
GAGGCTACGG TGGAGGCTAC AACCAAGGGG GCTCAGGAGG TCTTCTTGGA GATTTGCTTG
GTGGTGGTGG TGGTGGCTAC AATCAAGGCT ACGGTAACCA GGGCTATGGA AACCAAGGTG
GCCATCATGG TGGACACCAC GGAGGTAATG GTGGCTTCGG TGGAGGATTC GGCGGTGGAT
TCGGTGGAGA AGGACGTCAC GGTGGAGGAT TCGGCGGAGA AGGTCGTCAC GGTGGTGAGC
ATCACGGAGG TGGTCGTCAC AATGGAGGAG GATGGTAGAA TACCAGGTCT ACCGCTGTTG
AATTGTATCT GTTTTATATA CTGAGTATAT ATCTTCGAAT CTAAGAAAAT TGAATGAGCT
AGTCTTGCTG TGTATTTATG CTAGTATAGT AAAGCATGTT TTTCTACTTT GTTTCACATC
TAAATGAATT CATATTCTTG GTAATCATCT GGTTCATATT CAGTGTTCGA TCCGTCCCTT
TTTCGCAACC TCAGCAAGTT TTATAGAAAA CGCAATTTGT GTACAATAAT ATGCTAAAAT
GTATTCAAAT ATATTATATT CACCACGGAT CATCTACTTG TTGTCATATA ATC
 
Protein sequence
MSEGYDRQAP AVPEGEGSIP VNQSGSESSN QQLERPRLPQ LPEGWIAQWD DEYNHYFFVN 
TVTGESQWEI PESSVPGASE ARSSEFAPSD SNIADNESAE RGIGGDGTGE RGLGSVVGSL
LSGGNSGHQS GGTSGLISLV SSLASSKTSG GYGGGYGGGY GGGYNRPSHA PGSGGGAGSL
LGLLAGGSSG GYGGGYGGGY GGGYNQGGSG GLLGDLLGGG GGGYNQGYGN QGYGNQGGHH
GGHHGGNGGF GGGFGGGFGG EGRHGGGFGG EGRHGGEHHG GGRHNGGGW