| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68238 |
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| Symbol | PDB1 |
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| ID | 4840587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 61539 |
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| End bp | 62816 |
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| Gene Length | 1278 bp |
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| Protein Length | 389 aa |
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| Translation table | 12 |
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| GC content | 49% |
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| IMG OID | 640391902 |
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| Product | pyruvate dehydrogenase E1 component, beta subunit (PDH) |
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| Protein accession | XP_001386225 |
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| Protein GI | 126139405 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.36203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CATCTTACAC GTCAGATTCC AATGGCTCCC AAGTTATCCC AGATCGCCCA GACGGCCCGC
TTGGCCGCTT CGGCCACTAG AGCCCACAAC ATCGCCAATG TGACTGGAAA CACTACCAGA
TCCGTAGCCC AAGCTGGCCA GTACCAGGCA TTGAGAATGA TGGATTCGCG TGCCGCTTCG
TCGTCGGCTG TAGGCTCAAA GACCATCACC GTCAGAGACG CCCTTAATGC CGGGCTTGCC
GAGGAGTTGG ACAAGGACGA CGATGTCTTC CTCATGGGTG AAGAAGTGGC CCAATACAAC
GGTGCCTACA AGGTGTCACG TGGTTTGTTG GATCGTTTTG GTGAAAGACG TGTGATTGAT
ACCCCTATCA CTGAAATGGG TTTCACTGGT TTGGCTGTTG GAGCTGCCCT TCATGGTTTG
AAGCCTGTGT TGGAGTTCAT GACCTTCAAC TTCGCTATGC AAGCTATCGA TCAAATCGTT
AACTCTGCCG CTAAGACCTA TTACATGTCC GGAGGTAAAC AACCGTGTAA CATCACCTTC
CGTGGTCCCA ATGGTGCTGC TGCCGGTGTC GGTGCTCAAC ATTCGCAATG TTACGCTGCA
TGGTATGGAT CTATTCCTGG TTTGAAGGTT GTTTCGCCCT ACTCTGCCGA GGACTACAAG
GGTTTGATCA AGGCTGCCAT CAGAGACCCT AACCCAGTTG TGTTTTTGGA AAACGAAATC
GCCTACGGTG AAACCTTCGA TATCTCCGAG GAAGCTCTCT CCACAGACTT TGTTTTGCCT
ATCGGCAAGG CCAATGTCGA AAGAGAAGGA ACTGACTTGA CATTTGTATC GCATTCCAGA
TCTGTCAAGT TCTGTATGGA AGCCGCTGAA ACCTTGGAGA AGGAATACGG CGTCAAGGCC
GAAGTCATCA ACTTGAGATC CATCAAGCCT TTGGATGTTC CTACCATTGT TGAGTCAGTC
AAGAAGACTA ACCACTTGGT CACTGTTGAA GCCGGATTCC CAGCCTTTGG TGTTGGTTCT
GAAATCTGTG CCCAGATCAT GGAATCCGAG GCTTTTGATT ACTTGGATGC TCCAGTCGAA
AGAGTCACTG GTTGCGAAGT TCCAACTCCA TATGCTAAGG AATTGGAAGA CTTTGCTTTC
CCAGACGAAC CTACCGTAAT CAGAGCCGCC AAAAAGGTGT TATCTTTGTA AGCGGAACAC
GACATGCACA TTATAGATCA CACCTCTTAG AGTGTTCGTA GACTATCTAT GTATATACGA
ATAGGAAAAG GAGATAGT
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| Protein sequence | MAPKLSQIAQ TARLAASATR AHNIANVTGN TTRSVAQAGQ YQALRMMDSR AASSSAVGSK
TITVRDALNA GLAEELDKDD DVFLMGEEVA QYNGAYKVSR GLLDRFGERR VIDTPITEMG
FTGLAVGAAL HGLKPVLEFM TFNFAMQAID QIVNSAAKTY YMSGGKQPCN ITFRGPNGAA
AGVGAQHSQC YAAWYGSIPG LKVVSPYSAE DYKGLIKAAI RDPNPVVFLE NEIAYGETFD
ISEEALSTDF VLPIGKANVE REGTDLTFVS HSRSVKFCME AAETLEKEYG VKAEVINLRS
IKPLDVPTIV ESVKKTNHLV TVEAGFPAFG VGSEICAQIM ESEAFDYLDA PVERVTGCEV
PTPYAKELED FAFPDEPTVI RAAKKVLSL
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