| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66043 |
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| Symbol | |
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| ID | 4840461 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 224660 |
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| End bp | 227901 |
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| Gene Length | 3242 bp |
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| Protein Length | 1009 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391776 |
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| Product | predicted protein |
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| Protein accession | XP_001386255 |
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| Protein GI | 150866601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.219798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA ACCGTCAGCT TCTTTTGTTA GTTGGGCTTG TGTTCCATTT TTTCTACCTT
TGGTCCATTT TCGACATCTA CTTCGTCCTG CCCTTAGTAC ATGGAATGGA CCACCATGTT
TCCACGACTA CAGCACCAGC CAAACGTCTC TTTCTAATAG TGGGAGATGG ACTTCGTGCT
GACAAGACAT TCCAAAAATT GAAGCATCCA AGAACTGGCG AAACAAAATA CTTGGCTCCG
TACTTGAGAA GCATCGCTCA GAATGAAGGC ACCTGGGGCA TTTCGAACAC GAGAATGCCG
ACTGAGTCTA GACCTGGCCA CGTAGCCATG ATCGCTGGTT TTTACGAAGA TGTCTCTGCT
GTTACCAAGG GATGGAAGGA AAATCCAGTA GATTTCGACT CATTTTTTAA CCAATCGAAA
CACACCTATT CCTTTGGATC GCCCGATATC TTACCCATGT TCGCTTATGG TGAAGGAGTA
GTTCCCGGAA GAATCGACGT TTGTATGTAT GGCCACGAGT TCGAAGATTA TACCCAGAGC
TCGATCGAGT TGGACGCATT TGTGTTCAAA CACTTTGACG AGCTAATGGC CAATTCTGAG
ACCAACCAGA CACTACACGA CGAGTTGCAC GAGGAAGGAA ATGTCTTCTT CTTGCATTTG
TTGGGTCCAG ACACAGCCGG TCATGCCTAC CGTCCGTATT CGGCCGAATA TTACGAGAAT
ATCGAGTATA TCGACATGCA GTTGTCCAAG TTGATTCCTA GAATCCATGA ATTCTTTGGT
GATGATGATT CTGCCTTTGT TTTCACAGCT GACCACGGCA TGTCCGATTT TGGATCGCAC
GGTGATGGCC ATCCTGACAA CACCAGGACA CCGTTGATTG CATGGGGTGC CGGTGTTAAC
AAGCCTAAAC ATATAAAGGA CTTACCTGAT CCGCAAGCCC AAAGAGCAAA ACAAGATCCA
GTCCGCAGCG GATACGAAGA TACATATTTT GAAACGTGGG AACTTGACCA TTTGGTTAGA
AATGACGTCA AGCAGGCTGA TATCGCTTCG TTAATGGCTT ATTTGATTGG TGCAAACTAT
CCTGCCAATT CTGTAGGTGA GTTGCCTCTT GCGTACCTCG ACACCGATGC TGTGACGAAG
ATCAAAGCTC TCTTCGCTAA CGCTTTAGCT ATTATTGAGC AATACTATGT CAAAGAAAAG
GAAGTGTACA ACCACCAATT CAAGTTCAAG CCTTTCCGGC CCTTCGACGA AAAGTCAATC
GATGAATACA GCGGTCAAAT TAACTCATTT ATTTATTCCT TACAAAATGA ACAACTCAGC
CAATCTCAAA AGGAATTATT GGAAAAAGAG GCTGTCATGG TTGTGGAAGA ATTGATGAAG
ACAGCTTTGG ATGGATTGAA TTATTTGCAA ACTTACAACT GGTTATTGTT GAGATCCATC
GTCACATTGG GCTTCATTGG ATGGATCGTT TATGCTTTTG GTCTTTTCTT AAAGTTGTTC
ATTATATCAG AAGAGGATTT ACAAACTTTG AAACCAGGTA ATCTGATATT CTTGTTGCTG
TCTTTCTCTG CATTAGCATT GTCCACCAAC TACTTGCTTT TCTATCAAAA CTCGCCTTTC
AATTACTACA TGTATGCTGC ATTTCCATTA TACTTTTGGT ACACCATCTT CAATGAGCTC
ACCTATCTTG GAGAAGGTTT GAATCAGTTG TTGTACGGTA TCTCCATTCC AACTAGAGTT
TTCATCGCAG TTTCCTTCAT TGGAATGTAT GAAGGTATAG CTTACGGCTT TTTTGAAAGA
TTTGTGTTTT CGATCATCTT CGTCCTTATA GGATTGTACC CATTGTTCGT CTCAGGAAAT
GAAAAAGTAT CTACTTACCA AAAGCTTGTA TGGTTAGCAA GTTGCCTGTT AATGTGTATT
TTCACTAACT TGAACCCGGT GAAAGTTGAA AGCTTACTCC AAATTAATGC TGGTGCCTTG
TTTTCGTTGA TAATTGCTCT GATTGGTATC AGCAAAGTCT TTAAGAGACC TATAGAGTCT
GTACAGAAAA GGTTGGTCAT ACATCAATTG CTCATAATTC CTCTTATCTT GTACGCTACG
AATGTTTCTG TACTTTCATT GCAAGCTAGG AATGGTCTTC CTTTATATTC ACAAGTTCTT
GGTTGGTTGT CTTTTGTTGC ATCCTTATTG TTACCAGTAT TCCATTCGGT CTATCCTTCA
AAGGACTACG CCTTGAGATT ATTGATTATT TTCCTTACTT TTGTTCCTGC CTTTATTATC
TTGACCATTT CATTTGAATT GTTGTTCTAC AATGGATTCT CCTTGATATT GCTTCAATGG
CTCAATATCG AAGAGAATTT AAAATTCCCA AGAGCAGAAA TTATCAAATC ACAAGAAGAA
ACTGGAAGGT TACCGAAAGG GTATTGGTTG CAGTTGATTA GAATATCTAT CATCGGCTTC
TTTTTCCTTC AGTTAGCATT CTTTGGCACT GGTAACATTG CATCGATTTC TTCTTTCTCA
TTGGACTCAG TTTACAGGCT TATTCCTATA TTCGATCCTT TCCCAATGGG GGCGTTGTTG
ATGTTTAAAT TGATTGTTCC ATACGTGCTA CTTTCCACTT GTCTTGGTAT CATGAACCAC
AACTTGGAAA TCAGACAGTT CACAATTTCC ACATTAATTA TTTCTACAAG TGATTTCTTA
TCGTTGAACT TCTTTTTCTT AGTGAGAACG GAAGGTTCTT GGTTAGACAT TGGACTCAGT
ATCTCCAACT ATTGCTTAGC TATCCTATCT TCGCTTTTCA TGTTGATTTT GGAATTGGTC
GGTTCCATAA TTTTGCGCGG AGTCGAATAC AATGACAAGT GGACGGAGAA AGAAGAGTAC
AAAATAGAGG AAATAGAAAC TGAAGAAGAA AAAGCAGAGG AAGTTGAGGT TGTCGAAATT
GATGAAACTG AAGAAATTGA AGTAATTGAA ATTGTCGAAG TTAACGAAGA GGAAATTGAA
GATGAAGATG AAGATGTCGA GGATGAAGAA GAAGATGATG ATCACAACGG TGAAATAGAC
CCCAGAAACA TTATACCAGC CCAATCGGAG ACCGAGGAAT TGCCGATCAG CGCAAGAATA
AGACGGAGAG GCGCCAAGCG CGATTGAAAA GGAGGACAAA AACACTAGAT TTATTGTATA
GTATATATAT ACAAAGGTAT ACTACCAAAA AGTTTAGAAA TTAGACACCG GGAAATTATA
AC
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| Protein sequence | MNRNRQLLLL VGLVFHFFYL WSIFDIYFVS PLVHGMDHHV STTTAPAKRL FLIVGDGLRA
DKTFQKLKHP RTGETKYLAP YLRSIAQNEG TWGISNTRMP TESRPGHVAM IAGFYEDVSA
VTKGWKENPV DFDSFFNQSK HTYSFGSPDI LPMFAYGEGV VPGRIDVCMY GHEFEDYTQS
SIELDAFVFK HFDELMANSE TNQTLHDELH EEGNVFFLHL LGPDTAGHAY RPYSAEYYEN
IEYIDMQLSK LIPRIHEFFG DDDSAFVFTA DHGMSDFGSH GDGHPDNTRT PLIAWGAGVN
KPKHIKDLPD PQAQRAKQDP VRSGYEDTYF ETWELDHLVR NDVKQADIAS LMAYLIGANY
PANSVGELPL AYLDTDAVTK IKALFANALA IIEQYYVKEK EVYNHQFKFK PFRPFDEKSI
DEYSGQINSF IYSLQNEQLS QSQKELLEKE AVMVVEELMK TALDGLNYLQ TYNWLLLRSI
VTLGFIGWIV YAFGLFLKLF IISEEDLQTL KPGNSIFLLS SFSALALSTN YLLFYQNSPF
NYYMYAAFPL YFWYTIFNEL TYLGEGLNQL LYGISIPTRV FIAVSFIGMY EGIAYGFFER
FVFSIIFVLI GLYPLFVSGN EKVSTYQKLV WLASCSLMCI FTNLNPVKVE SLLQINAGAL
FSLIIASIGI SKVFKRPIES VQKRLVIHQL LIIPLILYAT NVSVLSLQAR NGLPLYSQVL
GWLSFVASLL LPVFHSVYPS KDYALRLLII FLTFVPAFII LTISFELLFY NGFSLILLQW
LNIEENLKFP RAEIIKSQEE TGRLPKGYWL QLIRISIIGF FFLQLAFFGT GNIASISSFS
LDSVYRLIPI FDPFPMGALL MFKLIVPYVL LSTCLGIMNH NLEIRQFTIS TLIISTSDFL
SLNFFFLVRT EGSWLDIGLS ISNYCLAILS SLFMLILELV GSIILRGVEY NDKGINEEEI
EDEDEDVEDE EEDDDHNGEI DPRNIIPAQS ETEELPISAR IRRRGAKRD
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