Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63754 |
Symbol | |
ID | 4840549 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 924063 |
End bp | 925325 |
Gene Length | 1263 bp |
Protein Length | 412 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391864 |
Product | predicted protein |
Protein accession | XP_001386187 |
Protein GI | 150866548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCTG TTCTTTCTTT CACTCGCCAA GTGTTCCTTA CCCTTGCTCT TTCATTGTTG GTTAACGGTT TGGTTGTTCC TTCTAATGAA GACTCAGTTG CTCTCGATAA GAGAAGTCCT GGTTTCCTTA AGCTTGACTT CACAGTTGCT AGAGGTCAAG GTAAAGAATC ATTGAACTTG ACCAGTACAA ATAAGCCATA CTTCGTTTAC CATGAAAAGT CGAAGAGAGC TACTGGTGAA CCTGAAGTTA CCTTGATTAA CGAAAAGACT TTCTACGCTA CTGACTTGGA AATAGGTTCT AACAAGCAAG CTGTTACTAC CCTCATTGAC ACTGGTTCTT CCGATTTGTG GGTCGTTGAT AAGTCTGCAA AATGTCAAGT GACTGAAACC GGACAGAGCT CAACCTACTG TTACGAATAC GGTGTTTACG ATCACACCAA GTCTTCTAGC TACCATAGCT TAGGAAGCAA GTTCTCGATT GAGTATGTTG ACGGTACTAG TTCTACTGGT ACTTGGGTCA AGGATGATGT ATACTTTGCT GGAACCACCA CTGGTGTTAC ACAGCTCCAA TTTGGTGATG TTACCACCAC TTCTTCTGGT TTTGGTGTTT TAGGTATTGG TTACGAGGCT AACGAAAGTA CCAACACTGA GTACCCTAAC TTGCCCGTCT TGTTGAAGAC CCAGGGTGTC ATTGCCAAGA CCGCCTACTC GTTGTACTTG GCCCAAGAGG ATGCTACCTC TGGGTCAGTC ATCTTTGGTG GTATCGACCA GGCTAAATAC CTGGGTTCGT TGATAACCTT GCCAGTTACA AGCTCGAGAG AATTGGCTAT CCATTTGGGA TCTGTTGCTA TTAATGGTAA GACCATATCT GCCAACCTTA ACCCAGTGTT GGACTCAGGT ACTACTTTGA CTTATTTGCC TACTAAGATT GTGGCCAGTA TTGCCAGTGC CTTGAGTGGT ACCGCCGATT CTAGTGTTGG TTACATCATT AACTGTAACC AACCAAGTAA CAAATACTTA ACTTTCAACT TTGATAGCGG TGCCACCATT AACGTCCCAC TCTCTGAATT GGCTATTGAT TTATACCTCA CAAACGGTCA GAAGTACCAA TACTGTGCTT TAGGTGTATT CGCTACCAGC AGTACCCCAA TTTTGGGTGA CAACTTCTTG AGAAGTGCCT ATGTTGCCTA CGATCTTGAT GACAACACTA TCTCCCTTGC CCAAGTGAAG TACACCACGG CTGAAAACAT TGTTCCATTT TAA
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Protein sequence | MVSVLSFTRQ VFLTLALSLL VNDSVALDKR SPGFLKLDFT VARGQGKESL NLTSTNKPYF VYHEKSKRAT GEPEVTLINE KTFYATDLEI GSNKQAVTTL IDTGSSDLWV VDKSAKCQVT ETGQSSTYCY EYGVYDHTKS SSYHSLGSKF SIEYVDGTSS TGTWVKDDVY FAGTTTGVTQ LQFGDVTTTS SGFGVLGIGY EANESTNTEY PNLPVLLKTQ GVIAKTAYSL YLAQEDATSG SVIFGGIDQA KYSGSLITLP VTSSRELAIH LGSVAINGKT ISANLNPVLD SGTTLTYLPT KIVASIASAL SGTADSSVGY IINCNQPSNK YLTFNFDSGA TINVPLSELA IDLYLTNGQK YQYCALGVFA TSSTPILGDN FLRSAYVAYD LDDNTISLAQ VKYTTAENIV PF
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