Gene PICST_63754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63754 
Symbol 
ID4840549 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp924063 
End bp925325 
Gene Length1263 bp 
Protein Length412 aa 
Translation table12 
GC content43% 
IMG OID640391864 
Productpredicted protein 
Protein accessionXP_001386187 
Protein GI150866548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCTG TTCTTTCTTT CACTCGCCAA GTGTTCCTTA CCCTTGCTCT TTCATTGTTG 
GTTAACGGTT TGGTTGTTCC TTCTAATGAA GACTCAGTTG CTCTCGATAA GAGAAGTCCT
GGTTTCCTTA AGCTTGACTT CACAGTTGCT AGAGGTCAAG GTAAAGAATC ATTGAACTTG
ACCAGTACAA ATAAGCCATA CTTCGTTTAC CATGAAAAGT CGAAGAGAGC TACTGGTGAA
CCTGAAGTTA CCTTGATTAA CGAAAAGACT TTCTACGCTA CTGACTTGGA AATAGGTTCT
AACAAGCAAG CTGTTACTAC CCTCATTGAC ACTGGTTCTT CCGATTTGTG GGTCGTTGAT
AAGTCTGCAA AATGTCAAGT GACTGAAACC GGACAGAGCT CAACCTACTG TTACGAATAC
GGTGTTTACG ATCACACCAA GTCTTCTAGC TACCATAGCT TAGGAAGCAA GTTCTCGATT
GAGTATGTTG ACGGTACTAG TTCTACTGGT ACTTGGGTCA AGGATGATGT ATACTTTGCT
GGAACCACCA CTGGTGTTAC ACAGCTCCAA TTTGGTGATG TTACCACCAC TTCTTCTGGT
TTTGGTGTTT TAGGTATTGG TTACGAGGCT AACGAAAGTA CCAACACTGA GTACCCTAAC
TTGCCCGTCT TGTTGAAGAC CCAGGGTGTC ATTGCCAAGA CCGCCTACTC GTTGTACTTG
GCCCAAGAGG ATGCTACCTC TGGGTCAGTC ATCTTTGGTG GTATCGACCA GGCTAAATAC
CTGGGTTCGT TGATAACCTT GCCAGTTACA AGCTCGAGAG AATTGGCTAT CCATTTGGGA
TCTGTTGCTA TTAATGGTAA GACCATATCT GCCAACCTTA ACCCAGTGTT GGACTCAGGT
ACTACTTTGA CTTATTTGCC TACTAAGATT GTGGCCAGTA TTGCCAGTGC CTTGAGTGGT
ACCGCCGATT CTAGTGTTGG TTACATCATT AACTGTAACC AACCAAGTAA CAAATACTTA
ACTTTCAACT TTGATAGCGG TGCCACCATT AACGTCCCAC TCTCTGAATT GGCTATTGAT
TTATACCTCA CAAACGGTCA GAAGTACCAA TACTGTGCTT TAGGTGTATT CGCTACCAGC
AGTACCCCAA TTTTGGGTGA CAACTTCTTG AGAAGTGCCT ATGTTGCCTA CGATCTTGAT
GACAACACTA TCTCCCTTGC CCAAGTGAAG TACACCACGG CTGAAAACAT TGTTCCATTT
TAA
 
Protein sequence
MVSVLSFTRQ VFLTLALSLL VNDSVALDKR SPGFLKLDFT VARGQGKESL NLTSTNKPYF 
VYHEKSKRAT GEPEVTLINE KTFYATDLEI GSNKQAVTTL IDTGSSDLWV VDKSAKCQVT
ETGQSSTYCY EYGVYDHTKS SSYHSLGSKF SIEYVDGTSS TGTWVKDDVY FAGTTTGVTQ
LQFGDVTTTS SGFGVLGIGY EANESTNTEY PNLPVLLKTQ GVIAKTAYSL YLAQEDATSG
SVIFGGIDQA KYSGSLITLP VTSSRELAIH LGSVAINGKT ISANLNPVLD SGTTLTYLPT
KIVASIASAL SGTADSSVGY IINCNQPSNK YLTFNFDSGA TINVPLSELA IDLYLTNGQK
YQYCALGVFA TSSTPILGDN FLRSAYVAYD LDDNTISLAQ VKYTTAENIV PF