| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63750 |
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| Symbol | MDR16 |
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| ID | 4840485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 490772 |
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| End bp | 492415 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391800 |
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| Product | multidrug resistance protein 6 benomyl/methotrexate resistance protein |
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| Protein accession | XP_001386112 |
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| Protein GI | 150866489 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.439145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0180876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATA GATTCATTAG AGACAGTTTT TTCGGCCGCG TTGTGTACCA CTTGTCTGGA
CATCAATTCT TCTCTCACAA AGAAGAGTCG TCTGATTATA TTGTTCCCGA GATATACCTT
AAGGGTACTG AAGGAGCGAA TTTCCTGAAG GAAGAAAATG AATTGAACCT GATTGTTAGT
AATTCTTTGT CCAGTCAACT GGAACAAACA ATATTGGCTG CAGATAGAAT TATCGTCGAT
TGGGATGGTG AAGACGACCC AGAAAACCCC GTTAATTGGC CATTGTACCA AAAAGCATTC
TTTATCTTCG AAATTGCATT TTTAACAGTC TCCGTATATA TGGGAGCTGC CCTTTATACT
CCCGGACTTG AGCAGATAAT GGAAGAATTT CATATCAGCC AAGTGGTTGC AACTTTGCCC
TTGACATTTT TTGTAATTGG ATACGGAATT GGACCTATGG TGCTCTCACC ATTATCTGAA
AATGCAGCTG TGGGTAGGAC TTCCATCTAC ATCATCACTT TATTTGTCTA TTTTATTTTA
CAGATACCAA CAGCCTTATC AAAAGACATT GCCTCGTTGA CAGTGCTCAG ATTCATAAGT
GGCATATTTG CTTCCCCATG CTTGGCTACT GGTGGTGCTT CTATTGCTGA AGTGTTGACA
GATCCATACG CCCCTGTTGG TTTGGCATGC TGGGCAATAG CAGGATTCTG TGGTCCCCTG
TTAGGTCCTT TCATTGGTTC AGTTTTGGTA GTGAAGGGAG GATGGAGATG GGCATTTTGG
TTCCAATGCA TCGCTACCGG TGTCTGCCTT TTGGTCTTGA CGTTCTTTTT ACCTGAATCT
TATGGTAGTA CCTTGCTCTA CAGGAAAGCC AAGAGATTGA GAAGGGTGAC TGGGAATGAA
AATATCACTA GTGAAGGAGA AATTGAAAAC AGTAAGCTAA CTCTCCGTGA GTTGGTTGTC
GAGACATTAT GGAGACCAAT TGAAATTTCA ATTCTTGAAC CAGTCGTCTT ATTAATCCAC
ATGCACATTG CTATGGTTTA CTCCATTTTA TATCTCTGGT TCGAAGCATT TCCGATTGTC
TTTATGGAAA CAAAAGGGTT CACACTTATC GAGTTGGGAA TGACGTATCT TTCTATCAAT
GTAGGGTCCT TCCTTGGTGC AGCTATCTAT GTTCCAATTG TATTGCATGC CTACACCAAG
AAAGTCCTCA ATAATGAAAC CATTGTGCCA GAAGTTTTTA TTCCTCTTGC TATTGTTGGA
AGTGTCTGCA TGCCAGTCGG GGTGTTCATC TTCGGTTGGA CTTCAGTCAA GGAGTTCCCA
TGGGTTGCTC CTTTAATTGG AGCAGCAATT TTCACTATTG GTGCTTTCTT CATATTCCAA
ACTTTATTCA ACTACATGGG AATGTCTTTC AAGAAATACT TAGCTTCGGC ATTTGCTGGA
AATGACTTAT TCCGTTCGGT TATAGCAGGT GTGTTCCCAT TATTCGGAAG ACCCCTTTTT
GAGAATTTGA AGACTGATAA ATATCCTGTC GGTTGGGGCT CCAGTATTCT TGGGTTTATT
ACTCTCGGAA TGGTTGCCAT CCCTGTACTA TTTTATCTTA ATGGTCCAAA ATTAAGGGCA
AGATCAAAGT ACTCCAGTCT TTAG
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| Protein sequence | MHYRFIRDSF FGRVVYHLSG HQFFSHKEES SDYIVPEIYL KGTEGANFSK EENELNSIVS
NSLSSQSEQT ILAADRIIVD WDGEDDPENP VNWPLYQKAF FIFEIAFLTV SVYMGAALYT
PGLEQIMEEF HISQVVATLP LTFFVIGYGI GPMVLSPLSE NAAVGRTSIY IITLFVYFIL
QIPTALSKDI ASLTVLRFIS GIFASPCLAT GGASIAEVLT DPYAPVGLAC WAIAGFCGPS
LGPFIGSVLV VKGGWRWAFW FQCIATGVCL LVLTFFLPES YGSTLLYRKA KRLRRVTGNE
NITSEGEIEN SKLTLRELVV ETLWRPIEIS ILEPVVLLIH MHIAMVYSIL YLWFEAFPIV
FMETKGFTLI ELGMTYLSIN VGSFLGAAIY VPIVLHAYTK KVLNNETIVP EVFIPLAIVG
SVCMPVGVFI FGWTSVKEFP WVAPLIGAAI FTIGAFFIFQ TLFNYMGMSF KKYLASAFAG
NDLFRSVIAG VFPLFGRPLF ENLKTDKYPV GWGSSILGFI TLGMVAIPVL FYLNGPKLRA
RSKYSSL
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