| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63741 |
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| Symbol | |
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| ID | 4840490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 542909 |
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| End bp | 545650 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391805 |
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| Product | predicted protein |
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| Protein accession | XP_001386300 |
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| Protein GI | 150866635 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00727] small oligopeptide transporter, OPT family
[TIGR00728] oligopeptide transporters, OPT superfamily |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.294425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGG TAGAAAAGAA GGAAAAGCTT GACAATATAG TCAGTATTGG CAGTGTTACA
TCTCACTTGC AATTAGAAGA TCATGAAGTG AATTTAAGAG CAATTACTTC TAATCCAGTC
TCAATTAATG AGATTGGTGT TTCACTTTCA AATGAGCAGA AGCATTTTAT CTTGAAGCGA
CTTCATTTGG ATGGCTTGCA ATCACTTGAC GAGTTGCCAC CACAAGTCAT CTTTTATTTG
GATAAAATTG AGAAATTGGG AAATGATGAA GCCTTGAGTA TTTTGAAAGA GACCCTTGTT
GAACATCATG ACGACACCAA TATTCCAACC CACGATTTAG AATTATGGAC TAAACTAGTT
GACATTGGAG CTGAGAATTC CGGTACGAGA GTAAAGTTAG ATTCTGCTCT CAACGAGAAG
AATAATGAGA GTGGTGAGCT GTCTTCTCAG GAAGTTTTTG AAGGTGGTAA ATACGAATCT
AGTATTCACC AAGTAGTTGA CTGGGACTTG CAACTTAGGT TGGAGGCAGT TTTGATTGCT
TACCACTCTC CTTACCCTGA AGTGAGATCT GTTACAGATC CATTTGACGA CCCCACGATC
CCAGTTGAAA CCATCAGAGT TTACATTCTA GGTATCGTTT GGACTGCCAT TGGTGCAGTT
ATTGATCAAT TCTTTTCTGA AAGACAGCCA GCAATAGCAT TGTATCCAGC TGTAGTTCAA
GTTTTCTTGT ATCCTTGTGG TTTATTGTTG GAATATGTCT TGCCGAAATA CAAGTTTAAA
ATATGGAAGT ACACTATCGA CCTCAACCCA GGACCATGGA ACTATAAAGA ACAGATGTTA
GCATCGTTGT TCTATTCTGT TACTGGGGGA GCGACAAGTT ATGTTTCTTA TAATATTCAT
GTTCAAAAGA TGAAAATGTT CTACGATAAT CAATGGGTTG ATTTCGGATA CCAAACATTG
TTGATTTTAT CAAACAACTT CTTGGGTTTT GGATTCGCTG GTATCTTCAG AAGATTTGCA
GTTTATCCAG TTGAAGCAAT CTGGCCAACA GTATTACCCA CTCTTGCCTT AAATAGAGCT
TTGATGGTGC CAGAAAAGAA AGAAATTATA AACGGTTGGA AGATTGCAAA GTACACATTC
TTTTTCATTG CATTCGCAGC TTCGTTCGTT TACTTTTGGA TTCCTAATTA CCTATTTGGT
GCATTGTCTA CTTTCAACTG GATGACGTGG ATCGCTCCTT TCAATTTTAA CTTAGTCGCC
ATCACTGGAA CTTTTTTTGG TTTAGGACTA AACCCAATAC CCAGCTTTGA CTGGAATGTT
CTCAGCTTGA ATGCTCCATT GATATATCCC TTTTATTCAC AATTGAATAA CTACATTGGT
AACATTTTAG GGTTTTTGGC TGTCGCTGGG GTCTACTGGA CAAACAGCAA GTGGTCAGGA
TACCTTCCAA TCAATTCACC ATCTCTCTAC ACAAATACAG GAGAGATATA TCGAGTTACT
TCTGTTGTCA ATGAAAATAG TTTATTCGAC ATTGAGAAGT ATCAAGAATA TGGACCACCT
TTCTACACTG CTGGAAACTT GGTTGCTTAT GGCTCCTACT TTGTTCTTTA TCCCTTTTCT
GTTGTTTATG AAATCGGTAC TAGATACAAA CAAACTTGGA GAGCGTTCAA GAGTCTCTAT
TTGAGTTTTA GAAACTTCAA GAAATCTACG TACGAAGGCT ATAATGACCC ACACTCCACC
ATGATGTCAG CTTATAAGGA AGTTCCAGAT TGGGTATTTT TGGTTGTTTT GGTGATTTCT
CTTGTGTTGG CTATTATTTG CGTTGAAATA TACCCTGCTG AAACTCCAGT TTGGGGTTTA
TTCTTTTCTT TGGGTATTAA TTTCGTTTTC TTGATTCCAA TTACTGCTGT TTACTCCAGA
ACTGGTTGGG GCTTCGGACT TAACGTCTTG GTTGAATTGA TTGTAGGTTA TGCTCTTCCG
GGTAACGGTC TTGCATTGAA CTTCATTAAA GCATTTGGAA CCAACATTGA TTCTCAAGCT
CAGAACTATA TCACCAACCA AAAGATGGCT CATTATTCCA AGGTTCCTCC AAGAGCTCTA
TTCAGAGTTC AAATCATTGG TGTTTTCATT GCCTCATTTG TTCAACTAGG TATTATCAAT
TTCTTAATTA ATAATATTGA AGATTACTGT GATCCACATA ACAAGCAAAA ATTTACTTGT
CCACATTCAA AAACATTCTA TAACGCCTCT ATTATTTGGG GAATTATTGG ACCTAAGAAA
GTTTTCAATG GGTTGTACCC AATCTTACAA TATTGTTTCT TGATTGGATT TTTGTTAGCC
ATTCTTGCAC TTGCCTTCAA GAAGTTTGCT CCTTTGAAGT ACACCAAATT CTTCGAACCA
ACATTAGTAA TCGGTGGTTT CATTAACTAC GGTGCTTACA ACCTTTCATA TTATACTGGT
TCTTTTTACC TTTCCGTTGT CTTTATGTAC TACATTAGGA ACAAGTACGA AGCATGGTGG
CAGAAATACA ACTATCTCTT GTCAGCTGCC TTGACTGCCG GTGTTGCTTT TTCTTCTATC
ATCATTTTCT TTGCAGTTCA ATACCATGAC AAGAGCATTT TGTGGTGGGG AAACAGTGTT
ATGTTCGGTG GTATAGAAGG CGGGTACGGA CAACAGTCGA TATTGAATGT CACCGAGGCT
CCAGGGGGAT ACTTTGGTCC AAGAATTGGA AATTTCCCAT AA
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| Protein sequence | MSKVEKKEKL DNIVSIGSVT SHLQLEDHEV NLRAITSNPV SINEIGVSLS NEQKHFILKR
LHLDGLQSLD ELPPQVIFYL DKIEKLGNDE ALSILKETLV EHHDDTNIPT HDLELWTKLV
DIGAENSGTR VKLDSALNEK NNESGESSSQ EVFEGGKYES SIHQVVDWDL QLRLEAVLIA
YHSPYPEVRS VTDPFDDPTI PVETIRVYIL GIVWTAIGAV IDQFFSERQP AIALYPAVVQ
VFLYPCGLLL EYVLPKYKFK IWKYTIDLNP GPWNYKEQML ASLFYSVTGG ATSYVSYNIH
VQKMKMFYDN QWVDFGYQTL LILSNNFLGF GFAGIFRRFA VYPVEAIWPT VLPTLALNRA
LMVPEKKEII NGWKIAKYTF FFIAFAASFV YFWIPNYLFG ALSTFNWMTW IAPFNFNLVA
ITGTFFGLGL NPIPSFDWNV LSLNAPLIYP FYSQLNNYIG NILGFLAVAG VYWTNSKWSG
YLPINSPSLY TNTGEIYRVT SVVNENSLFD IEKYQEYGPP FYTAGNLVAY GSYFVLYPFS
VVYEIGTRYK QTWRAFKSLY LSFRNFKKST YEGYNDPHST MMSAYKEVPD WVFLVVLVIS
LVLAIICVEI YPAETPVWGL FFSLGINFVF LIPITAVYSR TGWGFGLNVL VELIVGYALP
GNGLALNFIK AFGTNIDSQA QNYITNQKMA HYSKVPPRAL FRVQIIGVFI ASFVQLGIIN
FLINNIEDYC DPHNKQKFTC PHSKTFYNAS IIWGIIGPKK VFNGLYPILQ YCFLIGFLLA
ILALAFKKFA PLKYTKFFEP TLVIGGFINY GAYNLSYYTG SFYLSVVFMY YIRNKYEAWW
QKYNYLLSAA LTAGVAFSSI IIFFAVQYHD KSILWWGNSV MFGGIEGGYG QQSILNVTEA
PGGYFGPRIG NFP
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