Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63621 |
Symbol | |
ID | 4840526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 398110 |
End bp | 398376 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391841 |
Product | predicted protein |
Protein accession | XP_001386093 |
Protein GI | 150866473 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.733527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.260452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACTA TCAGAACAGA ACTGCAGCAG CAGGAACCGT TAGACTTGAT CAGATTCCAG TTGGACGAGT TTGTGCTTGT CAAGTTGAGA GGAGCTCGTG AAATGAAAGG AAGACTTCAG GGCTACGATT CCCATTGCAA CATGGTGTTG AGCGAAGCCG AAGAGTATAT TTATTCTGCT GGAGACGAAG AGACTGTAGT TAAGAAAACA GAGATGGTTT TTGTCAGAGG AGACTCGGTC ATCTTGATAA GTCCTATTTC TGAATGA
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Protein sequence | MSTIRTESQQ QEPLDLIRFQ LDEFVLVKLR GAREMKGRLQ GYDSHCNMVL SEAEEYIYSA GDEETVVKKT EMVFVRGDSV ILISPISE
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