Gene PICST_63619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63619 
SymbolKRE6 
ID4840638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp842612 
End bp844060 
Gene Length1449 bp 
Protein Length482 aa 
Translation table12 
GC content42% 
IMG OID640391953 
ProductBeta-glucan synthesis-associated protein 
Protein accessionXP_001386172 
Protein GI150866533 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.463894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AACTTGGGGC AATTTTTGGC AGTTATTGCT CTTATTTCTA TTATTGTCTT TGGCTCTATT 
GGATATGTGA TAATGACAGC TAGAAGCTAC TATAAGCCTC TTGAACCTGA AGTATACGAA
GTGTTGTCTT ACTATAAATA TCCAACCCTT TCAGCCATTC GTACATCTTT GATTGACCTT
GACACGCCAA AGGAAGCTCA TACCAAAAAC AGCTTCCATG ATAATGAACC CTGGAAATTG
GTTTTCTCTG ATGAGTTTAA TGTTGAAGGA AGAACTTTCC ATGAAGGGGA CGACCAATTC
TTCACTGCTG TCGATCTTCA CTATGCAGCC ACCAATGACT TGGAATACTA TACACCTCAT
ATGGCCGAAA CTATAAACGG AAGCTTGAGG ATCACTATAG ATGCTTACCA AACAAATGGT
TTGGACTATA TTTCAGCTAT GTTGCAATCA TGGAACAAAC TCTGTTTCAA CAAGAATGCA
ATGGTTGAAG TCAGCTTACG AATGCCTTCT TACTCACAAT CAAAAGGTCT TTGGCCAGCA
GTGTGGTCCT TGGGAAATTT AGCTAGGCCA GGATATATGG CCACAACTGA TGGAGTATGG
CCATATACAT ATGACGAATG CGACTATGGA ATTACGCCCA ATCAGTCTTC GCCGGATGGA
ATATCATACT TACCGGGACA GCGGTTAAGC AAGTGTACCT GTCTTGGACA AGACCATCCC
AATCTTGGAG TTGGCAGAGG GGCACCTGAA ATTGATATAA TAGAAGGAAC CCATGCTGGC
TATGATGATT GGGCTCTTGG TGCACAGACA TTACAGGTTG CGCCATTTGA TCCCTGGTGG
AGACCAGACT ACGACTTCTT GACTATTGAA AACTACAACC ATACTTCCAT GAAAGCTGAC
ACTGGTACCC CACAACAGGA GTCGATTGCT TCCACCACTG TGCTCAATCT GGAATGGTTC
GAGAGTTTGA GAAACCGTTC TAACTATAGC CAGAGTTTAC AGAACCACAC CCATTTCCAG
ACTTACGGAT TTGAATATAG AAGTGAAAAG ACAGAAGAAA GAGACAGTTA CATTCAGTTC
TTTGTTGCAG ACGAAAAGAC TTTTGGAGTA TATGGAGATT CATTGCATCC AGCGGGAAAT
GTTGGTTGGA GACAGATAAC CAGGGAACCA ATGTCATTAA TTTTCAACTT GGGGTTATCA
CCTACTTGGC AAACTATTGA CTTTGCATCT CTAGACTATC CTGCTACACT TGAAATAGAC
TATATTAGAA TATACCAACG TGAAGGTGAA GAAGAAATGA CTTGCGATCC ACCAGATTAT
CCAACTGTTG ATTATATCAA TTCGCATATT GCTGCCTATC TGAACGTTAA TTTCACCAGT
TGGGAACAGG CTGGGTATAA AACTCCTCGA AACAGCTTTA TGCATGGATG CCTTGCGCCA
ATTAAGTAA
 
Protein sequence
NLGQFLAVIA LISIIVFGSI GYVIMTARSY YKPLEPEVYE VLSYYKYPTL SAIRTSLIDL 
DTPKEAHTKN SFHDNEPWKL VFSDEFNVEG RTFHEGDDQF FTAVDLHYAA TNDLEYYTPH
MAETINGSLR ITIDAYQTNG LDYISAMLQS WNKLCFNKNA MVEVSLRMPS YSQSKGLWPA
VWSLGNLARP GYMATTDGVW PYTYDECDYG ITPNQSSPDG ISYLPGQRLS KCTCLGQDHP
NLGVGRGAPE IDIIEGTHAG YDDWALGAQT LQVAPFDPWW RPDYDFLTIE NYNHTSMKAD
TGTPQQESIA STTVLNSEWF ESLRNRSNYS QSLQNHTHFQ TYGFEYRSEK TEERDSYIQF
FVADEKTFGV YGDSLHPAGN VGWRQITREP MSLIFNLGLS PTWQTIDFAS LDYPATLEID
YIRIYQREGE EEMTCDPPDY PTVDYINSHI AAYSNVNFTS WEQAGYKTPR NSFMHGCLAP
IK