Gene PICST_63552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63552 
Symbol 
ID4840682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp437464 
End bp438336 
Gene Length873 bp 
Protein Length290 aa 
Translation table12 
GC content43% 
IMG OID640391997 
Producthypothetical protein 
Protein accessionXP_001386285 
Protein GI150866624 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.495223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGG TTCAACAGAT CCTCTTGACC GCCTTGGCTG GCTTGGTCAT TGTGCTTGTG 
CTCTTTTTTG TTCAGTCTGG TGGAATTTCC AGAACATTTA CCTCCAGTAG CTCTCCCTAC
TTCAAGCCTA CTTTTCTAAT TCTAGGAGCC AACAACGCCG GAAAAACGAG CTTGTTCTAC
CGTTTCGTAG ATGATTCTGT TCCAGAAGGC AAGAAACGTC CTGTAACTCC TACGGTCTCG
TCCATTGAAC CGAACATCAC TGAGATAGAA TTGCCTTTTT CCAACAACTC CATCTCCAGG
GTCTACCAGT TGGTAGATTA TCCAGGCCAT TTGAAGTACT TTCAGCTTTT CTACAAGCTT
CTCTTGGAAG ACATAACGCT ACAAAAAGTG AAAGGTATAG TTTACGTAAT CGACTCGTCG
TCTCAGTGGT TTAATAATAG TGAGAATATA GAGGTTATCT CCAAGTATCT ATTTAATTTG
TTTCTGGTAA CAGAAAGATT GCAGAACGGA GTGGACTTCC TCTTCGCCGT CAACAAAAAC
GACTTGTTCG ACTCAGTGCC AGTCCACAAA GTCAAGAGTG TTCTTGAGGC CGAAATCAAC
AAGTTGATCC AGAACGAGTT GAACACTGTA GACAAACAAT CTGGAATCGA CAAGAGTGAA
GACGACGCAG AATCAGATGA ACAGTACTCA AGCACGATTG GACATGAATC TTTAAGAGAA
TTCTGGTTGA GTGTCATTGG AAGACCAGAA AACAAGTTCA CATTCGACCA ATTAGAGGGA
AACACCGATT TCGTCGCTGG CTCTGTGTTG AAGAATAAGG TCGAGACATG GGAAAACTGG
TTTGACGAGA AAGTCGTCAA TTCCAATCTC TGA
 
Protein sequence
MDLVQQILLT ALAGLVIVLV LFFVQSGGIS RTFTSSSSPY FKPTFLILGA NNAGKTSLFY 
RFVDDSVPEG KKRPVTPTVS SIEPNITEIE LPFSNNSISR VYQLVDYPGH LKYFQLFYKL
LLEDITLQKV KGIVYVIDSS SQWFNNSENI EVISKYLFNL FSVTERLQNG VDFLFAVNKN
DLFDSVPVHK VKSVLEAEIN KLIQNELNTV DKQSGIDKSE DDAESDEQYS STIGHESLRE
FWLSVIGRPE NKFTFDQLEG NTDFVAGSVL KNKVETWENW FDEKVVNSNL