| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63502 |
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| Symbol | FRD1 |
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| ID | 4840745 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 135373 |
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| End bp | 135891 |
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| Gene Length | 519 bp |
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| Protein Length | 165 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640392060 |
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| Product | Frataxin homolog, mitochondrial precursor Contains: Frataxin homolog intermediate form |
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| Protein accession | XP_001386043 |
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| Protein GI | 126139041 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1965] Protein implicated in iron transport, frataxin homolog |
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| TIGRFAM ID | [TIGR03421] iron donor protein CyaY
[TIGR03422] frataxin |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.157875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAGGC AAGTTTTGCG TTATTCCGGT CGATTCTCGT CTCTAGGAGT GAGAAAATAC
GCACCAGCCA TAGCTCCTAG AGCCACAGTG TTGAGCTCTC CAACCAGACA TGTTTCTGCA
ATGGCTACTA GAGCCTACTC TTTGAGCACA TCAGGCGAAG ACATTGAGGA CAAGATTGAT
CAAATCAGCG TCAACGAATA CAACAGCATC AGCGAAGAGT ATTTGGAGTC TTTGGCCGAT
TCCTTGGAAG ACTTAAGTGA AAAATACCCG CAGATCGACT GTGAGTTAAG TCACGGGGTC
ATGACATTGA CGATTCCACC ACACGGTACT TACGTTATTA ACAAACAGCC ACCTAACAAA
CAGATCTGGT TGAGCAGTCC AGTGAGCGGT CCCAAGAGAT ACGACTTGAT TGGCGGTCAG
TGGATCACGT TAAGAGATGG CTCCGCCTTG ACAGAATTGA TAACCGAGGA AGTTTCTTCT
GCTCTAGGTA CAGAAGTCAG TCTCGACATA GAAGGATAG
|
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| Protein sequence | MFRQVLRYSV RKYAPAIAPR ATVLSSPTRH VSAMATRAYS LSTSGEDIED KIDQISVNEY
NSISEEYLES LADSLEDLSE KYPQIDCELS HGVMTLTIPP HGTYVINKQP PNKQIWLSSP
VSGPKRYDLI GGQWITLRDG SALTELITEE VSSALGTEVS LDIEG
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