Gene PICST_63418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63418 
Symbol 
ID4840698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp717141 
End bp718355 
Gene Length1215 bp 
Protein Length404 aa 
Translation table12 
GC content44% 
IMG OID640392013 
Productpredicted protein 
Protein accessionXP_001386150 
Protein GI126139255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.316998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.630881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCG ACTTAAACAT GCCAGATATG CCAGAGCCTC CAGCTGCTTC TTCTGCTTCA 
GCATCTGAAG ATGCTTCCGC CTCCGCTGCT ACTGATTCTG CTCCCAAGGC CGAAGAGCCA
AAAGCTAAGG AGGTACCAAA GCCCACAGAA GAACCAAAGA CTAAGGAAGA GCCAAAAGCA
GAAGAGCCCG AAGATGTTAC TATGGCTGAA CCAGAAGAAA ACACAAAGGA ACTTGCTGAC
AAGGCTAAAG CTGAGGGTAA TGCCTTATAC AAACAGAGAA AGTTCGATGA AGCCATTGCT
GCCTACAATA GAGCCTGGGA TACCCACAAG GATATCACTT ACTTAAACAA CAGAGCTGCT
GCCGAGTTTG AAAAAGGCGA TTACGATGAA ACTATCAAGA CCTGTAACGA AGCCATTGAA
CAAGGCAGAG AAGTTAGAGC TGACTACAAG ATCATTGCTA AGTCGTTCGC CAGATTGGGT
AATGCCTACT TGAAGAAGGA AGATTTGGAA AATGCCGTTA AATACTTTGA CAAGTCTTTA
ACTGAACACA GAACCCCTGA TGTTTTGAAC AAATTAAGAG CAACCCAAAG AGAAATCAAA
ATAAGAGAAG CAAACTCGTA CGTTGATCCA GAAAAGGCCG AAGCTGCTAG GTTAGAAGGT
AAAGAATACT TTACCAAGGG GGACTGGCCA AATGCGGTTA AGGCTTATAC TGAAATGGTT
AAGAGAGCTC CGGAAGATGC CAGAGGCTAT TCCAACAGAG CCGCTGCTTT GGCCAAGTTG
TTGTCTTTCC CAGATGCTGT TGAAGACTGT AACAAGGCAA TTGAGAAAGA TCCATCTTTC
ATTAGAGCAT ATATCAGGAA GGCCAATGCC CAGTTGGCCA TGAGAGAATA TGCCCAGGTA
ATGGAAACTC TTAACGTAGC ACGTGAAAAG GACTTAGCAT TAGGTGAAGG CAAGAACGTT
TCTGAAATTG ACCAGTTGTT CAACAAAGCC GCATCCCAAC GTTTCCAAGC AATTGAAGGT
GAAACTGCTG AACAGACAAT GGAAAGAGTC TCTAGGGACC CGGAAATTGT TTCTATATTG
CAAGACCCAG TTATGCAAGG AATTTTGGGT CAAGCCAGAG AGAATCCAGC TGCCTTGCAA
GATCACATGA AGAACCCAGA AGTCAGCAAG AAGATCAACA TGTTGATTGC TGCTGGTGTT
ATTCGTACAA GATAA
 
Protein sequence
MGIDLNMPDM PEPPAASSAS ASEDASASAA TDSAPKAEEP KAKEVPKPTE EPKTKEEPKA 
EEPEDVTMAE PEENTKELAD KAKAEGNALY KQRKFDEAIA AYNRAWDTHK DITYLNNRAA
AEFEKGDYDE TIKTCNEAIE QGREVRADYK IIAKSFARLG NAYLKKEDLE NAVKYFDKSL
TEHRTPDVLN KLRATQREIK IREANSYVDP EKAEAARLEG KEYFTKGDWP NAVKAYTEMV
KRAPEDARGY SNRAAALAKL LSFPDAVEDC NKAIEKDPSF IRAYIRKANA QLAMREYAQV
METLNVAREK DLALGEGKNV SEIDQLFNKA ASQRFQAIEG ETAEQTMERV SRDPEIVSIL
QDPVMQGILG QARENPAALQ DHMKNPEVSK KINMLIAAGV IRTR