Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63418 |
Symbol | |
ID | 4840698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 717141 |
End bp | 718355 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392013 |
Product | predicted protein |
Protein accession | XP_001386150 |
Protein GI | 126139255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.316998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.630881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATCG ACTTAAACAT GCCAGATATG CCAGAGCCTC CAGCTGCTTC TTCTGCTTCA GCATCTGAAG ATGCTTCCGC CTCCGCTGCT ACTGATTCTG CTCCCAAGGC CGAAGAGCCA AAAGCTAAGG AGGTACCAAA GCCCACAGAA GAACCAAAGA CTAAGGAAGA GCCAAAAGCA GAAGAGCCCG AAGATGTTAC TATGGCTGAA CCAGAAGAAA ACACAAAGGA ACTTGCTGAC AAGGCTAAAG CTGAGGGTAA TGCCTTATAC AAACAGAGAA AGTTCGATGA AGCCATTGCT GCCTACAATA GAGCCTGGGA TACCCACAAG GATATCACTT ACTTAAACAA CAGAGCTGCT GCCGAGTTTG AAAAAGGCGA TTACGATGAA ACTATCAAGA CCTGTAACGA AGCCATTGAA CAAGGCAGAG AAGTTAGAGC TGACTACAAG ATCATTGCTA AGTCGTTCGC CAGATTGGGT AATGCCTACT TGAAGAAGGA AGATTTGGAA AATGCCGTTA AATACTTTGA CAAGTCTTTA ACTGAACACA GAACCCCTGA TGTTTTGAAC AAATTAAGAG CAACCCAAAG AGAAATCAAA ATAAGAGAAG CAAACTCGTA CGTTGATCCA GAAAAGGCCG AAGCTGCTAG GTTAGAAGGT AAAGAATACT TTACCAAGGG GGACTGGCCA AATGCGGTTA AGGCTTATAC TGAAATGGTT AAGAGAGCTC CGGAAGATGC CAGAGGCTAT TCCAACAGAG CCGCTGCTTT GGCCAAGTTG TTGTCTTTCC CAGATGCTGT TGAAGACTGT AACAAGGCAA TTGAGAAAGA TCCATCTTTC ATTAGAGCAT ATATCAGGAA GGCCAATGCC CAGTTGGCCA TGAGAGAATA TGCCCAGGTA ATGGAAACTC TTAACGTAGC ACGTGAAAAG GACTTAGCAT TAGGTGAAGG CAAGAACGTT TCTGAAATTG ACCAGTTGTT CAACAAAGCC GCATCCCAAC GTTTCCAAGC AATTGAAGGT GAAACTGCTG AACAGACAAT GGAAAGAGTC TCTAGGGACC CGGAAATTGT TTCTATATTG CAAGACCCAG TTATGCAAGG AATTTTGGGT CAAGCCAGAG AGAATCCAGC TGCCTTGCAA GATCACATGA AGAACCCAGA AGTCAGCAAG AAGATCAACA TGTTGATTGC TGCTGGTGTT ATTCGTACAA GATAA
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Protein sequence | MGIDLNMPDM PEPPAASSAS ASEDASASAA TDSAPKAEEP KAKEVPKPTE EPKTKEEPKA EEPEDVTMAE PEENTKELAD KAKAEGNALY KQRKFDEAIA AYNRAWDTHK DITYLNNRAA AEFEKGDYDE TIKTCNEAIE QGREVRADYK IIAKSFARLG NAYLKKEDLE NAVKYFDKSL TEHRTPDVLN KLRATQREIK IREANSYVDP EKAEAARLEG KEYFTKGDWP NAVKAYTEMV KRAPEDARGY SNRAAALAKL LSFPDAVEDC NKAIEKDPSF IRAYIRKANA QLAMREYAQV METLNVAREK DLALGEGKNV SEIDQLFNKA ASQRFQAIEG ETAEQTMERV SRDPEIVSIL QDPVMQGILG QARENPAALQ DHMKNPEVSK KINMLIAAGV IRTR
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