Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63252 |
Symbol | |
ID | 4840739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 102572 |
End bp | 103015 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640392054 |
Product | predicted protein |
Protein accession | XP_001386034 |
Protein GI | 126139023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000185749 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.478938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCAGTGACTG TCGACCGAGA ATTGCCAGAC CCCTTTGCCA ACCAGAAGAA GAACAGAAAG TACTTTGTCT CATATGCTAT TGGAATCACA CTCGCCTGTG CCATCATCTT CAACTACGAA AAGACCAGAT CGCCCATCAC CAACTCTACC TTGTACTTTT TGCGTAGATC GGCTCTTGCC AAGGAGCATT TGGGAGAGGG GATCGACTTC AGAAGCTCGT GGCCGTGGAT TTCTGGGCCG TTGAACACCG TTAAAGGTGA TATCGATATC AGTTTCGTCG TCCAGGGTTC CAAGAGCAAG GGTGTCTTGA AGTTGAAGGC TAGCAGAGAC ACGAAGTTGC ACCCTTTTGA AGTTCACCAT TTCATTTTGG AAGTGACTGA CAGCAATGGC CAGGCTGTGG AGTACGACTT GACGAAGGAC CCTGCAGTTG AGTTTGACAT TTAG
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Protein sequence | PVTVDRELPD PFANQKKNRK YFVSYAIGIT LACAIIFNYE KTRSPITNST LYFLRRSALA KEHLGEGIDF RSSWPWISGP LNTVKGDIDI SFVVQGSKSK GVLKLKASRD TKLHPFEVHH FILEVTDSNG QAVEYDLTKD PAVEFDI
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