| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63097 |
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| Symbol | |
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| ID | 4840559 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 1023892 |
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| End bp | 1026279 |
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| Gene Length | 2388 bp |
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| Protein Length | 790 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391874 |
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| Product | predicted protein |
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| Protein accession | XP_001386384 |
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| Protein GI | 150866706 |
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| COG category | [K] Transcription |
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| COG ID | [COG5190] TFIIF-interacting CTD phosphatases, including NLI-interacting factor |
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| TIGRFAM ID | [TIGR02250] FCP1-like phosphatase, phosphatase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC TGACACCGAT AACGTTGCCC CAGTCGGTGC CTTTTCCTGT GACCATCACT
TCCATCGACT GTTCTGTTGG CCAAACGGTT GCAAAGCACA AGCCCATTTT CAAGTACAAG
TACTGGGAAT ATCAGGATGA TCCCAATTCC CAGGAAGCTG TCCCTCCCAA AATCAGAGTT
GAACGTATTG GAACATTCGA AAGCCCTATT GAAGGTGAAG TGCAGCAAAT AAACATTGCT
GTTCTCGACG AAGTAGCCCA TTCCGGTATT GAACTCTGTC TGATTAGAGA ACCATGTAGT
CATACTGTCC AATACGGAGG TCTTTGTGCA CTTTGCGGTA AAGCTGTTGA AGATGAGAAA
GACTACTCAG GCTATACTTT CGAAGATCGA GCCACTATTT CCATGTCACA TGATAACACT
GGACTCAAGA TCTCGCTCGA TGAAGCTGCT AAAATCGAGC AGTCAACTAC CGACAGACTC
AATGAAGAGA AAAAGCTCAT TCTCGTAGTA GACTTGGATC AAACAGTCAT CCACGCCACT
GTGGACCCCA CTGTAGGCGA ATGGCAACTG GATCCATCCA ATCCCAATTA TCCTGCCATT
AAGGATGTCA AGACATTCTG TCTTGAAGAA GAAGCCATTG TTCCTCCAGG ATGGACGGGA
CCTCGCTTGG CTCCTACCAA ATGCTGGTAC TACGTTAAAG TGAGACCAGG GCTTTCGGAC
TTTTTGGAAG AGATTGTTAA CCTCTACGAA ATGCATATCT ACACAATGGC AACTAGGAAC
TACGCCCTTG CCATAGCCAA AATAATCGAT CCCACTGGAA AATACTTCGG TGACAGGATA
TTAAGTCGTG ACGAGAGTGG CTCTTTGACG CACAAGAACT TGAAGCGTCT TTTCCCAGTA
GACCAGTCCA TGGTAGTAAT CATTGACGAT AGAGGTGATA TTTGGCAGTG GGAGAGCAAC
CTTATCAAGG TAGTACCGTA TGACTTCTTT GTAGGCATTG GAGATATCAA TTCCAGTTTC
TTGCCTAAGA AGAATGGGCA ATTGACAGGT CCTACCAAGA AGAGAAAGTC CATTGCCAAA
TTGGAAGCTC AGGCCACAGC TGAGCTTCAA GTAGAAGAAG AACCTTCGTT TGATGATGAT
GAAGACAAAG CCGCTGCTGA TTTAGATGCT GACTCAGCAT CACCAGTGGA TAGAATTCTC
GAACTTGGTG GAGGCGAAGG TAACACCGAT CTCTTGATAG AACAGTCAAT CACCAGAAAC
CAATCTATAG AGCAACAGCA GTCCGAAAGA CCGCTTGCTA AATTGCAACA TGATTTAGAG
AAAATGCATC ACCATGAGCA GGATGGACAT TCGAGGTCCA ATTCTCCTGA CGGAACATCG
GCTGATGAGG AAGAAGATGA CGACGATGAT GAAGATGATA ATTTGCTTTA CGACGACGAT
AACGAATTGA CTGCATTAAA CAAAGTGTTG ATCAACATTC ACAACCAATA CTATAAGATC
TTGGGTGAAA ACATCCTTAA GAACTCTTCA TTGAAGCCAG ACTTGACCAA GATCATTCCA
TACATGAAGA GTCAAACTCT TGAAGGAATT ACTGTGTTGT TCTCAGGAAT AATTCCCTTG
GGAATTAACT TTGAAAATGC TGACATCGTC ATCTGGTGCA AGCAATTTGG CGTCAAGGTA
GTAAATGAAG TGTACCCAGA AGTGACCCAT GTAGTTTGTA GGGATCCTAG CAACGGTCAG
GGACCTACAT TTAAGGCACG AGTTGCCAGA AAGATACTAC CTGATGCTCA TATCGTCAAC
CCTGATTGGT TGTTTGCGTG TCTTAGTGCA TGGAACAAAG TTGACGAAGC TGACTACTTG
ATCCCGCTTG GGGACGAGAA GTTATGGGTT GTTAGAAGTA AAGATATTGA AAAGTACCAA
AAGGCACTTG AGAATCAGAA ACAGAAAGAA GCCGACCGCT CAATTCAAAG GCCTCGTTTT
GGATCCATAG ATTCAATCGA GGAGTACGAT CTCGAGCAGG CTAATCAAGA GGTTGATGAA
TTCTTGGCAG GCATCAGCGA CGATGACGAA GATGACGAAG ATGACTTGGA AGCCACATTG
GTGGACGAGA TTAGAAATGG GGGAAATTAT AAGAATGTCA ATGAAGAAGA TGAATACGAC
GAGGAACTTG AAAACGGCAA GTCCGCTGAT TCCTTCATTA AAGAACTCTA CAGCACCAAG
AAGAGAAAAC ACGAACAAGA GGAAGAAGAC GAGAGTGAGA ATGAGGTTGT GGAGGAGCCA
GAGTCAAATG GCCAGGTGCA CAAAAAACAG AAACCTTCGA AGGATGAGGA CCTTGATGAG
CTTGAACAGG AATTGCTTGA TGGGTTTGAC GATTTGGAGG AGGACTAG
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| Protein sequence | MSDSTPITLP QSVPFPVTIT SIDCSVGQTV AKHKPIFKYK YWEYQDDPNS QEAVPPKIRV
ERIGTFESPI EGEVQQINIA VLDEVAHSGI ELCSIREPCS HTVQYGGLCA LCGKAVEDEK
DYSGYTFEDR ATISMSHDNT GLKISLDEAA KIEQSTTDRL NEEKKLILVV DLDQTVIHAT
VDPTVGEWQS DPSNPNYPAI KDVKTFCLEE EAIVPPGWTG PRLAPTKCWY YVKVRPGLSD
FLEEIVNLYE MHIYTMATRN YALAIAKIID PTGKYFGDRI LSRDESGSLT HKNLKRLFPV
DQSMVVIIDD RGDIWQWESN LIKVVPYDFF VGIGDINSSF LPKKNGQLTG PTKKRKSIAK
LEAQATAELQ VEEEPSFDDD EDKAAADLDA DSASPVDRIL ELGGGEGNTD LLIEQSITRN
QSIEQQQSER PLAKLQHDLE KMHHHEQDGH SRSNSPDGTS ADEEEDDDDD EDDNLLYDDD
NELTALNKVL INIHNQYYKI LGENILKNSS LKPDLTKIIP YMKSQTLEGI TVLFSGIIPL
GINFENADIV IWCKQFGVKV VNEVYPEVTH VVCRDPSNGQ GPTFKARVAR KILPDAHIVN
PDWLFACLSA WNKVDEADYL IPLGDEKLWV VRSKDIEKYQ KALENQKQKE ADRSIQRPRF
GSIDSIEEYD LEQANQEVDE FLAGISDDDE DDEDDLEATL VDEIRNGGNY KNVNEEDEYD
EELENGKSAD SFIKELYSTK KRKHEQEEED ESENEVVEEP ESNGQKPSKD EDLDELEQEL
LDGFDDLEED
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