| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62972 |
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| Symbol | SEF2 |
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| ID | 4840451 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 650572 |
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| End bp | 652584 |
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| Gene Length | 2013 bp |
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| Protein Length | 649 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391766 |
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| Product | putative transcription factor |
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| Protein accession | XP_001386136 |
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| Protein GI | 150866507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.150077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC AACTGAAAAA CCGTCTAAGG TTGATAATAC CGGCGCTGCT GTCTGGCTCC
AAGGTGCTCA AGTCTTGCAT TCGCTGCCGC AAACATAAAA CCAAATGTAA TGCTCTGGTA
ACCAATCCTT TGCCTTGCAC TCACTGTGCC AAACACAAGA TCAACTGTGT CTTGGAAGTG
ATAACACCGC TGACTAACAG ATCGACTATC GATTTGGCTG AAAAACTTGC TGACGAAGTC
TCCGACTTAA AACAGGTCAT GGCAAAGATA ATCTCCAGAA GAAATGCCTT GTTCGAAAAA
CTAGCCAGCA GCGGACTTGA CATTCAAAGT ATAGCACAAC AGCAAAAGCA AAAGAACCAG
CTCTGTAGAC GAGCCCGCTC GGAGACCCCA CCAGTATCCG AAATCCAATC TTGCATCAAT
ACCCCTCAAG ACTTCGCCAT ACCGTTGACA GCCCCTGTGG ACTATGGCTT ACAGGAAAAC
GACAACGAAC CTGTATTTTC CATTTCTGCA AATAAAAGCT TGCAATCGTT TGCTATTTCG
AACGCAACTG CATCAAGACT CTTTGCTAAC TACGAACGGA ACTTCAACCA GTTTTTGCCC
ATTTTTCCAG ACAACTTCTT CAAATCGATA AATTTGAAGA CGTTTGCAAA CGAGAATGAC
TTGCTTTTCT GGTGCATAAT CTTGACTTCA TATTTAAACA ACCCCGTAGA CCAATCGGCT
CCAAGCTACC GTATCTTGTC TGAACACATC AAATCTTTAG TTGTCGAGAA ATGCTGGCTC
CAAACTCCAA GGTCAGTGTA CGTCATCTCG TCGTTGTTGA TTTTGACCAC TTGGCCATTG
CCCAACACTA GTTCCAAAAT CTCTGACAAC TTGTGTATCA AGTTCATTTC GACAATGAAG
GCATTGTCGT TACAATTTGG ATTGCACAAG TTGGAGTTCA TCAATGAATT CAGTCACAAG
ACCAAAATGA ACATCTCACA AGAGGTCAAT CTTGACAACC TAATCAGAGA AAGAATATAT
AAGTTCATCA ACATCAACTC CAACTACTGG CTCATAAACT TGGGTTTATC AAACAATAAT
TACAACGGAT TTACCCAGGA CTACATCATC AACAAATCCT CTAACATAGA CATCTTGAAC
AAGACGTCTG AAGGTGATCA TTACATAAAC TCACTCTTGA AGATCTCTAT GATCCAATCA
AAATTGAACG AAAACATGAA TATTTTGATA GGAAATAACA GCGAGTCGGT TTCGTTATTG
CCTAACCAGT TGAATACGTC CAAATTGATT AACTTCAATA TGTTTGAAAT CATCATTGAT
GACTTGAACA AGATATTGGT CAGAGATGAC AATTCACTTG TATTGAATAA TTTGATCAAG
ATTTCAATTG AGTTCTCCAA ATTGCAATTG TTTGTGTATT CCTTATCTAA GTCTGATATC
ACAATTTTGG AATACAAACA TTATATTACA AAAGTGTTGA AAAGTTGTTT TATCATCTTC
TCATCGCAAT TCCAGGACAA TTCGTTGAAC TTCAACCAAT TGCCTATTCA CTATAAGTTT
CCTATTGAAT TGGCTATGTT GATCATGCTC AGAGTATTCA AGTCTCCAAT CATGAACTCG
ATCTCAGACT ACAAGCTTGT CAAAGAAAAG TTCAACCAGA TGTACGACAA CATCATCATG
GGTGGTAAGA ACAACGAGGA CTGGGAATTT TTGAATGCTA GATTGAATAA GGTTCTTCAC
AAGTTCAACA AAATAGACAA CAAGTTTATC ATCCTGAAAA TGACGAGACA TAATGACAAT
GACAAAGTTG TACCTTCATT TTTTCTTATA AATAAGATGA AGAGCTATCT CATTGCAAGT
TTGAACTACG AGATGATCTG GCTCATCTAC GAAAACGAAC ACACGCAAAC TACAATAAAT
AACGAAGAAA TTAACTGGGA TGTTTTTGGG ATCAAAGACA ATAGAATGGA TATGATTGAT
TACTTGCAAA GTAACGAATC TATATTTTAC TAG
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| Protein sequence | MQTQSKNRLR LIIPASSSGS KVLKSCIRCR KHKTKCNASV TNPLPCTHCA KHKINCVLEV
ITPSTNRSTI DLAEKLADEV SDLKQVMAKI ISRRNALFEK LASSGLDIQT RSETPPVSEI
QSCINTPQDF AIPLTAPEND NEPVFSISAN KSLQSFAISN ATASRLFANY ERNFNQFLPI
FPDNFFKSIN LKTFANENDL LFWCIILTSY LNNPVDQSAP SYRILSEHIK SLVVEKCWLQ
TPRSVYVISS LLILTTWPLP NTSSKISDNL CIKFISTMKA LSLQFGLHKL EFINEFSHKT
KMNISQEVNL DNLIRERIYK FININSNYWL INLGLSNNNY NGFTQDYIIN KSSNIDILNK
TSEGDHYINS LLKISMIQSK LNENMNILIG NNSESVSLLP NQLNTSKLIN FNMFEIIIDD
LNKILVRDDN SLVLNNLIKI SIEFSKLQLF VYSLSKSDIT ILEYKHYITK VLKSCFIIFS
SQFQDNSLNF NQLPIHYKFP IELAMLIMLR VFKSPIMNSI SDYKLVKEKF NQMYDNIIMG
GKNNEDWEFL NARLNKVLHK FNKIDNKFII SKMTRHNDND KVVPSFFLIN KMKSYLIASL
NYEMIWLIYE NEHTQTTINN EEINWDVFGI KDNRMDMIDY LQSNESIFY
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